Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00121 ATGACATACCTGCTTAACCACCCCGCACTGATTCCATCACCTTGGCGTTATCACTTCCCCGCAACCACAACCACAACCTCAACTTCAACCTCAATCAGAATCACCCCAATTCAGAGCCAGAGCCATGGGTGGGCCCTCACAGGCAAGGCAGTTGTTGGTTCGGGTTCAACAATAAGATGCATGGCGAATCCGAGAAGGGTGAAAATGGTGGCCAAGCAAATAAGGAGGGAGCTTTCTGATATGCTCCTTACAGATAAAATCTTGCAGTATGCTGTTCTTCCCGAAGCTTCCTTAGGAGCCGACCGTTATCTCTCTTCCCTCACCACCATCACCGACGTTGAAGTCTCCGCCGATTTGCAGGTGGTTAAGGTGTATGTATCTGTTTTTGGAGATGAAAGAGGAAAGGAAGTAGCCATTGCTGGCTTGAAGTCAAAGGCTAAATATGTTCGTAGTGAGTTGGGGAAGCGTATGAAGTTGCGGTTAACTCCTGAGATACGCTTTTTAGAGGATGAATCTTTTGAGAGAGGAAGCAGGGTAGTGATTGCAATATTAGATAAAATAAAGAATGAAAAGAGCACAGAGAGTCAAAACCAGGAGCAGTTGGATGATGACGATAATTGGGATGGTGAAGACCCTGACGAAGGTATCATTTATGTGGAGTAG 663 0.4615 MTYLLNHPALIPSPWRYHFPATTTTTSTSTSIRITPIQSQSHGWALTGKAVVGSGSTIRCMANPRRVKMVAKQIRRELSDMLLTDKILQYAVLPEASLGADRYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKEVAIAGLKSKAKYVRSELGKRMKLRLTPEIRFLEDESFERGSRVVIAILDKIKNEKSTESQNQEQLDDDDNWDGEDPDEGIIYVE. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00121 220 MobiDBLite consensus disorder prediction 190 220 - -
Seca4g00121 220 Gene3D - 61 177 IPR015946 -
Seca4g00121 220 Coils Coil 184 204 - -
Seca4g00121 220 NCBIfam 30S ribosome-binding factor RbfA 61 188 IPR000238 GO:0006364
Seca4g00121 220 SUPERFAMILY Ribosome-binding factor A, RbfA 61 177 IPR023799 -
Seca4g00121 220 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 54 220 IPR000238 GO:0006364
Seca4g00121 220 Hamap Ribosome-binding factor A [rbfA]. 65 183 IPR000238 GO:0006364
Seca4g00121 220 FunFam probable ribosome-binding factor A, chloroplastic 61 177 - -
Seca4g00121 220 ProSitePatterns Ribosome-binding factor A signature. 149 170 IPR020053 GO:0006364
Seca4g00121 220 Pfam Ribosome-binding factor A 66 179 IPR000238 GO:0006364
Seca4g00121 220 MobiDBLite consensus disorder prediction 199 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00121 Seca-Chr4 1823959 1826733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00121 K02834 - gmx:100812407 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00121 4 1823959 1826733 Seca4g00121 4 1823959 1826733 ECH