Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00099 ATGTCGTCTTCGTTTCCGGTAGATTCGTCTCAGTCTCATCACGAAGGAAATTTGAAAAATCCGGTAGATTCATCTCAGTCTCATCACAATGGAAATTTGAGAAATCCGGTAGATTCGGCTCAGTCTCATCACAATGGAAATTTGAGAAATCCGGTAGAATCGTCTCAGTCTCATCACAATGGAAATTTGAGAAATCCAGACGCACTAAGTACCGTGGCAGAAATTGAGAAATCAAAGGTATTGGATAGGCCAAGGACTTTGAATATAGAGAGACAGAGATCATGTGATGAAAGATCATTGAGTGAACTATCCATAGGCTTATCTCCACGTCAATTGTCCACAAAAGCTGAGAACTCTTCTCGTCTGGGTGAACATCCTGACAATGCATGTTTTCCTCAGCCAAAGTCAGGTATTAATACTCCAAGATCACTCACATTGGATCCACATCCAATAACATCTGAAGCTTGGGAAGCTCTGAGGCGTTCCTTGGTATATTTTCGTGGTCAACCAGTTGGCACAATTGCTGCCTTGGATAATTCAGAAGAGAATCTCAATTATGATCAGGTGTTTGTAAGAGACTTTGTCCCAAGTGCTTTGGCTTTTCTGATGCATGGGGAACCAGACATTGTTAAAAATTTTATCTTGAAGACCCTTCGTCTTCAATCATGGGAGAAAAAGATTGATAGGTTCCAGCTAGCCGAAGGAGTAATGCCTGCTAGTTTTAAAGTATTCCATGATCCAGTCAGAAACCATGAAACCCTGATAGCAGATTTTGGTGAGAGTGCAATAGGCAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATATTACTTCGTGCATACACAAAGGCTACAGGAGACTCTTCTCTGGCTGAACGGCCTGAATGTCAAAAGGCGTTGTTCTTCATGGCTTTAAGATGTGCCTTGCAATTGCTTAAGCAAGATGCTGAAGGGAAAGAATTCATGGAACGAATTGTCAAACGCTTGCATGCCTTAAGCTACCATATGAGAAGCTACTTTTGGTTTGATTTGAAGCAACTTAATGATGTATATCGCTACAAAACAGAAGAGTACTCACATACTGCAGTCAACAAGTTTAATGTTATTCCTGATTCTCTACCAGATTGGATTTTCGATTTCATGCCTCATCATGGTGGATACTTTATTGGTAATGTAAGCCCGGCTAGGATGGATTTTCGCTGGTTTTGCCTGGGTAATTGTATTGCAATTTTGTCCTGCTTGGCAACACCTGAGCAGTCCATTGCAATCATGGATCTCATTGAGTCACGGTGGGAGGAATTAATTGGGGAGATGCCTGTCAAAGTTTGTTATCCAGCCATTGAAAGCCATGAATGGAGGATCGTAACAGGATGTGACCCAAAAAATACTAGATGGAGTTATCACAATGGTGGATCTTGGCCAGTTCTTTTATGGCTTCTGTCTGCGGCCTCCATCAAGACTGGGCGACCCCAAATTGCAAGACGTGCCCTTCACATTGCTGAGACCAGATTGCTGAAGGACAGCTGGCCTGAATATTATGATGGAACGCTTGGTAGATACATTGGGAAGCAGGCACGTAAATACCAGACTTGGTCTATTGCTGGTTACTTGGTGGCTAGGATGATGCTGGATGATCCATCACATTTAGGTCTTATAGCACTGGAAGAAGACAAACAGCTAAAGCCTTTACTCAAGAGATCAAATTCATGGACTTTGTGA 1722 0.4233 MSSSFPVDSSQSHHEGNLKNPVDSSQSHHNGNLRNPVDSAQSHHNGNLRNPVESSQSHHNGNLRNPDALSTVAEIEKSKVLDRPRTLNIERQRSCDERSLSELSIGLSPRQLSTKAENSSRLGEHPDNACFPQPKSGINTPRSLTLDPHPITSEAWEALRRSLVYFRGQPVGTIAALDNSEENLNYDQVFVRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFQLAEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKATGDSSLAERPECQKALFFMALRCALQLLKQDAEGKEFMERIVKRLHALSYHMRSYFWFDLKQLNDVYRYKTEEYSHTAVNKFNVIPDSLPDWIFDFMPHHGGYFIGNVSPARMDFRWFCLGNCIAILSCLATPEQSIAIMDLIESRWEELIGEMPVKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLSAASIKTGRPQIARRALHIAETRLLKDSWPEYYDGTLGRYIGKQARKYQTWSIAGYLVARMMLDDPSHLGLIALEEDKQLKPLLKRSNSWTL. 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00099 573 Gene3D - 249 545 IPR012341 GO:0005975
Seca4g00099 573 MobiDBLite consensus disorder prediction 99 119 - -
Seca4g00099 573 FunFam probable alkaline/neutral invertase B 299 540 - -
Seca4g00099 573 PANTHER - 300 567 IPR024746 GO:0033926
Seca4g00099 573 MobiDBLite consensus disorder prediction 92 145 - -
Seca4g00099 573 SUPERFAMILY Six-hairpin glycosidases 157 540 IPR008928 GO:0005975
Seca4g00099 573 MobiDBLite consensus disorder prediction 1 71 - -
Seca4g00099 573 Pfam Alkaline and neutral invertase 300 547 IPR024746 GO:0033926
Seca4g00099 573 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00099 Seca-Chr4 1442324 1446896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00099 - - lja:Lj1g3v3343910.1 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00099 4 1442324 1446896 Seca4g00099 4 1442324 1446896 ECH