Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05669 ATGCGGAGAGATTCATCTTCCGACGAAGAAGGTGACCATCACAATCTCATCGAGCAAAACGAGAGGAAGCCCCCTACTCCCACCTCCACCTTCCACATCGAAGACTTCACATCCCGACTCTCACGCTTCAATTCCAAGCTCAAGTTCCAAAAGAGGTACCTCTTCGCCATTCTCCCTCTCTTCATCATCGTCCTCTTCTATTTCGCTCCCGATGTCCACTCTCTCTTCTCCACCTCCTCCACCTCCCTCACTCTCTCCTCTCTCAACAACAATGACCAAACCAAGGAATCTCAATTGCGTGCTCTTTACCTCTTGCGCCAACAGCAATTAGGGCTTCTCCGCGCTTGGAATTCAACCATTCATCTCAATTCCACTTCCCAAACGCCCGATTTCGAGGATCTTAAATCCGCGCTGTTCCACCAGATTTCCCTCAACTCACAGATTCAACAGGTTCTTCTCAATCCCCACGCGACTGAAAACTCGGTTGACTTTTGGAATGCAAGTTCGGGTGTTGCTGGTTATGATAGGTGCAGAACAGTGGATCAGAACTTGTCACAGAGAAGAACCATCGAGTGGAAGCCCAAAGCTGGTAAATATTTGCTTGCTATATGTGTTTCGGGGCAAATGTCTAACCATCTCATTTGCTTGGAGAAGCATATGTTTTTCGCGGCTCTTCTAAACCGGGTTTTGGTTATTCCGAGTTCTAAGGTGGATTATGAGTATGATAGAGTATTGGATATTGACCACATCAATAAATGCATGGGAAAGGGAACAAAGGTAGTGATCCCCTTTGAAGAATTTTCTAGTATTAAGAAGAATCACATGCACATAGATAAGTTCCTGTGTTATTTTTCATTGCCTGAACCCTGTTTTCTAGATGATGAGCGTCTGAGGAAGTTGAAGTCGTTGGGTTTGTCAATGAGTAAGCCTGAGCCTGTGTGGGTCGAGGATACAAGGAAACCCAAAAGAAAGACGGTTCAAGATGTTCTCTCTAAGTTTTCACATGATGATGATGTTATGGCAATTGGGGATGTTTTCTATGCTGACGTGGAGCGAGAGTGGGTGATGCAACCTGGTGGTCCACTCGCTCACCACTGCAAGACTCTCATTGAACCCAGCCGTCTCATTCTGCTCACTGCTCAGCGTTTTATTCAAACCTTCCTAGGAAGGAACTTCATTGCATTACATTTTCGAAGACATGGCTTTTTGAAGTTCTGTAATGCCAAGAAACCAAGTTGCTTTTATCCTATTCCTCAAGCTGCAGATTGCATCTTGCGTGTGGTTGAAAGAGCCAATGCACCCGTCATTTATCTTTCTACAGATGCGGCAGAAAGTGAAACTGGTCTGCTTCAGTCACTAGTTGTGATAAATGGAAGGCCTGTTCCACTTGTTAAACGCCCAGCTCGTAATTCAGCAGAAAAATGGGATGCTTTGTTATACAGACATCATATTGAGGGAGACCCTCAGGTGGAAGCTATGTTGGACAAGACTATATGTGCCATGTCAAGCGTGTTCATTGGAGCCTCCGGTTCAACTTTCACTGAAGACATCCTGCGGCTAAGAAAGGACTGGGGATCAGCATCATTGTGCGATGAGTACCTTTGCCAAGGTGAGGAGCCAAATGTTGTAGCGGAAATTGAATGA 1644 0.455 MRRDSSSDEEGDHHNLIEQNERKPPTPTSTFHIEDFTSRLSRFNSKLKFQKRYLFAILPLFIIVLFYFAPDVHSLFSTSSTSLTLSSLNNNDQTKESQLRALYLLRQQQLGLLRAWNSTIHLNSTSQTPDFEDLKSALFHQISLNSQIQQVLLNPHATENSVDFWNASSGVAGYDRCRTVDQNLSQRRTIEWKPKAGKYLLAICVSGQMSNHLICLEKHMFFAALLNRVLVIPSSKVDYEYDRVLDIDHINKCMGKGTKVVIPFEEFSSIKKNHMHIDKFLCYFSLPEPCFLDDERLRKLKSLGLSMSKPEPVWVEDTRKPKRKTVQDVLSKFSHDDDVMAIGDVFYADVEREWVMQPGGPLAHHCKTLIEPSRLILLTAQRFIQTFLGRNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCILRVVERANAPVIYLSTDAAESETGLLQSLVVINGRPVPLVKRPARNSAEKWDALLYRHHIEGDPQVEAMLDKTICAMSSVFIGASGSTFTEDILRLRKDWGSASLCDEYLCQGEEPNVVAEIE. 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05669 547 MobiDBLite consensus disorder prediction 1 20 - -
Seca2g05669 547 CDD O-FucT_like 362 521 - -
Seca2g05669 547 FunFam O-fucosyltransferase family protein 366 535 - -
Seca2g05669 547 Gene3D - 367 531 - -
Seca2g05669 547 MobiDBLite consensus disorder prediction 1 29 - -
Seca2g05669 547 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 87 545 IPR045130 GO:0036066|GO:0046922
Seca2g05669 547 Pfam GDP-fucose protein O-fucosyltransferase 218 521 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05669 Seca-Chr2 142870341 142873461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05669 K03691 - gmx:100776069 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05669 2 142870341 142873461 Seca2g05669 2 142870341 142873461 ECH