Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05653 ATGGTTATGGCACTAAGACTTTTAATTTCACTCTATTGGTTTTGGTTTTGCTTGATTCTGATTTGCATCTCAGCGGTGAAGGAATCATCACAACAAGACACTCAGAAGCAGAAGCTTCGCTTTGGGAAAAATGGAGAGTTCAAGATCTTGCAGGTTGCAGATATGCACTATGCTAATGGGAAGACTACCCGGTGCTTGGACGTGCTTGATTATCAGTATGCTTCTTGCTCTGACCTCAATACCACTACTTTCCTTCAAAGGATGATCCTTGCTGAGAACCCCAACCTTATTGTCTTCACTGGTGATAATATATTTGGATTTGATGCCTCGGATTCAGCTAAATCATTGGATGCAGCATTTGCACCTGCAATTGCTTCTAACATTCCTTGGGTAGCTGTTTTGGGTAATCATGACCAGGAAGGTCCCCTCTCTAGGGAAGGGGTGATGAAACATATTGCTGGGATGAAAAACACTTTATCTAAAGTCAATCCTCCGGAAGTACACATAATTGATGGTTTTGGGAACTATAACTTGGAGGTTGAAGGGGTTGAAGGCACAGATTTTGAAAATAAATCAGTGCTCAATCTGTACTTTCTCGATAGTGGAGATTACTCCAAGGTTCCTTTCATTCCTGGCTATGGTTGGATCAAACCCTCTCAGCAACTTTGGTTCCAAAGAACATCTGCCAAGCTCCGGAAAGCATACATGAATGAGCCAATGCCTCAAAAAGAAGCTGCTCCTGGTCTTGCATACTTTCACATCCCATTGCCTGAATATGCTAGTTTTGACTCATCAAACTTCACAGGTGTGAAACAAGAAGGCATTAGTTCTGCTTCTGTGAATTCTGGCTTCTTCACAACATTGGTTGAAGCAGGAGATGTAAAGGCAGTTTTCACTGGCCATGATCACGTCAATGACTTCTGTGGCAAGCTGACAGGATTAAATCTTTGTTATGCTGGGGGATTTGGATATCATGCTTATGGAAAAGCTGGATGGTCAAGGAGGGCAAGAGTGGTGGTAGTTAACTTGGAGAGAACAGAGAAGGGTCGTTGGGAAGATGTCAAGTCAATTAGAACATGGAAACGCCTCGATGATCAACATCTTACTGGAATTGATGGCCAGGTCTTATGGAGCAAGAGTTTTGGCAACCGCAGGAAAAAACAAGACGGTGGCTCTTGA 1179 0.43 MVMALRLLISLYWFWFCLILICISAVKESSQQDTQKQKLRFGKNGEFKILQVADMHYANGKTTRCLDVLDYQYASCSDLNTTTFLQRMILAENPNLIVFTGDNIFGFDASDSAKSLDAAFAPAIASNIPWVAVLGNHDQEGPLSREGVMKHIAGMKNTLSKVNPPEVHIIDGFGNYNLEVEGVEGTDFENKSVLNLYFLDSGDYSKVPFIPGYGWIKPSQQLWFQRTSAKLRKAYMNEPMPQKEAAPGLAYFHIPLPEYASFDSSNFTGVKQEGISSASVNSGFFTTLVEAGDVKAVFTGHDHVNDFCGKLTGLNLCYAGGFGYHAYGKAGWSRRARVVVVNLERTEKGRWEDVKSIRTWKRLDDQHLTGIDGQVLWSKSFGNRRKKQDGGS. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05653 392 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 16 380 - -
Seca2g05653 392 SUPERFAMILY Metallo-dependent phosphatases 43 368 IPR029052 -
Seca2g05653 392 Gene3D - 46 356 IPR029052 -
Seca2g05653 392 Pfam Calcineurin-like phosphoesterase 47 304 IPR004843 GO:0016787
Seca2g05653 392 CDD MPP_Dcr2 45 328 - -
Seca2g05653 392 PIRSF Ptase_At2g46880 1 377 IPR011230 -
Seca2g05653 392 FunFam Probable inactive purple acid phosphatase 29 46 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05653 Seca-Chr2 142737822 142741932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05653 - - gmx:121174150 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05653 2 142737822 142741932 Seca2g05653 2 142737822 142741932 ECH