Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05635 ATGGAAGAAGAACAAACCTCCCAATCCCAAAACCAACGTCACCATCTCTCTCCTCCCAAAAAACAAATGAACAAAGGTTCTCCCTACAGCCCCAGTGCAGGTAAACGTGCAGTTTGCACAGTCATCACCATCTTTCTCCTATTAGCTGGCATCACTCTCCTTGTCCTCTGGCTCGTCTACCGTCCCCACAAACCCCGTTTCACAGTCGTCGGCGCCGCCATCTACGGCCTCAACACAACCGCACCACCGCTTATGTCCACCGCCTTGCAGTTCAACATCCTCATAAGGAACCCAAACAAGCGTGTCACCATGTACTTTGACAAGTTCTCTGCTTTAGTGTCTTACAGGAACCGAGCCATAACACCGCAGATTATGCTGCCACCGCTATATCTAGAGAAGCACAGCCAGGTGTCGTTGTCTCCGGTGATCGGAGGCACGCCGGTGCCGGTGTCGGTGGAGGTGTCAAATGGGTTGATGGTGGATGAGGCTTATGGGGTGGTGGGTCTGAAACTGGTGTTTATGGGGAGACTGAGGTGGAAAGCAGGGGCCATAAGAACTGCACATTATGGGCTCTATGTTAAGTGTGATGTGTTGATAGGTTTGAAGAAAGGTTTTGTTGGTCAGGTTCCTCTGCTTGGAAATCCACCTTGCTACGTTGATCTTTGA 666 0.5075 MEEEQTSQSQNQRHHLSPPKKQMNKGSPYSPSAGKRAVCTVITIFLLLAGITLLVLWLVYRPHKPRFTVVGAAIYGLNTTAPPLMSTALQFNILIRNPNKRVTMYFDKFSALVSYRNRAITPQIMLPPLYLEKHSQVSLSPVIGGTPVPVSVEVSNGLMVDEAYGVVGLKLVFMGRLRWKAGAIRTAHYGLYVKCDVLIGLKKGFVGQVPLLGNPPCYVDL. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05635 221 PANTHER OS05G0367900 PROTEIN 36 200 IPR044839 GO:0098542
Seca2g05635 221 MobiDBLite consensus disorder prediction 1 31 - -
Seca2g05635 221 MobiDBLite consensus disorder prediction 10 29 - -
Seca2g05635 221 Pfam Late embryogenesis abundant protein 93 191 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05635 Seca-Chr2 142568216 142568881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05635 32 199 EF-hand Containing Proteins AT5G21130 21.053 3.34e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05635 - - lja:Lj1g3v5060670.1 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05635 2 142568216 142568881 Seca2g05635 2 142568216 142568881 ECH