Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05548 ATGGCGGACTCGACCAAGGTGCGGTTGGTGCGTTGCCCAAAGTGTGAAAATCTCCTTCCAGAGCTCGCCGATTACTCTGTTTATCAATGTGGTGGTTGCGGTGCTGTTCTTCGAGCGAAGCAGAAAGGTTATGTGAGTGGTAGCTTGTCAGATGAGGGGAAGGGTGGAGGAGATTCTGGCAAATCAGAAAATTCATTGGTGAAAGGCTTGGTGAATCCCCCCAGTGATACTTCAGATGTTGATGCTAAGTCTAACAGTGGTCCCTCGAGGTATGATAATCAAAGGGATGTGGATAAAGCAAATAACGGACAAGAGAAAATTCTGAATCAATCTGAGGATGCTGATGAGAAAGGGTTTTTTGAGAATGATGTTGATGTCAAAAGAAACAAAGATGAAGTAGGTAAAGCAATAGGAAGAGAACAGGAGGAACCCAAGTCTCAAATTGGTCATGAAAATGGGTCCAAATTCTCTGGGAGAATTTCTAATTGGCAAAATGGAGAGACAAGTGAAATGGAGGGGTTTCGGAGAAAACATCAAGCTGATATGGAAAATGTGAGATTTTCCACTTCAAATTATCCTGATGAGGGACCATCAAATGGCTATTTTGGTTTTTCTCATAATTATATGGAACCATGGAGGAATAATAAAGGAACAGATGGTGCAAAAAGGGTTCAACACCTTGAGCAGGATCGAGCTGAGCTTCTAAGGAAGCTGGATGAGTTAAAGGACCAGCTCAGTAAGTCTTCTGAAGTGGTTAACAACTCAAAAGAAAAGGCTCTTCCTGATGAAAGGATGATTCCCCCAGATCCTCATCCTTATGGCGCCTCTGATCCTTGGTTTTCCGATGGATCATCGGGGTTGAACAGGACTTCAAGGCAGTTATTCGGTGCTGATAAACATATGGCTGGTCCCCCTCATTTCAATTATCATCATGATCCATATCCTTATCCAAGCAGTCATGAAATGGTTGTGCCTAACTTCCATCCTTCAATGCATAATCCAAGTCAATATGGTGATCCTTTTGCATCCCAAATGCTGAGGAGAGGTCCACATCAGTTCCCACAACCATTGCATCCCTACTTTCCTGGACGCTATGTTGATGCTAATCCAGATTCATACGAACTATATGCACATAATGCAATGCTTCATCCATCTTCTTGCTCTTGTTTCCATTGCTATGACAACAAACGAAGAGGTCCAGTGCCAGCCCCACCTGCTTCATTCATTAACAGCAGATTCCCTGACACCCCAAATGATCCTATGTTGTATCATCATGAGGTCCCAGGAGCATTTGGTTCACATGTTCATAATTCTAGAACTTCCATTCCTCCTGCGCCTTTTCGTGAAAAACAATTACATACAAGATGGCCTAGTGACTTCAACTCTGATATCGGTGGTTTTGTTCGAAGCCGTCCTCGGAAAGTAATGGTAGCTAGTAGTAGCCAACGTTGCCGACCTGTAGCTGGTGGTTCACCTTTTATCACGTGTAATAATTGCTTTGAGTTACTGCAACTTCCTGAAAAAGCAGTGGTTCTGGTGAAAAATCAGCAGCAGAAAGTGCAATGTGGGGCATGTTCTTCAGAAATCAGCTTTGCTATCATCAATAAGAAGCTGGTTATTTCTCCTCCTTCAGAAATGAAGGGAGTTTCCACAAGGGGTGATGATAGTTCTAATGAGGTTGTGAGTAGCCATGTGTCACATTCCCGTGGTCATGTGAACAGGAGTGGTGCTAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCTCTCAGTAGATAAAGAACCTCTTTCACTGGTTGCTTTGAACTCTAACAATTCCCAAGAGATGCAGAGTTTTCATTCTTCATCTCCCAGTACCTCTGAAGATGAAGATAGTCCGGAAGTGATGATTGCTCCAAGGGAGGCCACTAAATCCATTCATCAGCCAACCAAAGACTCTCTGTCTCCTCCTGCCGGTTCACCTCTACAAGAGTATTTTGATTACTCTAATAATAATCATGCAGTGAATCGATTTGGAAAAGGCAACCGAAGTAGTCGCTCAGAGCAAGAGAAGACAAAAGTGGACAAGATAACATCACGGCAAAACTCCTTGAAAGAGACAGCACTTGCAACTGAGATGGATGTCCATGATTATTCTAACACTGGGGTCTCTCAGGATTCTAGAGATGCTAGCCGAGAACATGATCATCCTAGATCTAACAAAGGAGGTGAATCATTTTTTGCAAACATCATCAAGAAAAGCTTCCGGGATTTCTCCCGATCTAATCAAACAGATGGTCGTGGCAAGATTAATGTTACTGTGAATGGGCAGCCCCTATCAGATCGTGTGATTAAGAAGGCTGAAAAGCTAGCTGGACCAATTCAGCCTGGAAATTATTGGTATGATTTTCGGGCTGGATTTTGGGGTGTCATGGGTGGGCCTTGTCTTGGAATAATTCCTCCATTTATAGAAGAGTTCAATCATCCCATGCCAGACAAATGTTCGGGTGGGAATACTGGTGTTTTTGTAAATGGTAGGGAACTTCACCAAAAAGATTTGGATTTGCTTTCTGGAAGAGGACTTCCCTATGATAGTGATAGATCTTACATCATTGAGATTTCTGGGAGAGTCCTGGATGAAGACACAGGAGAAGAGCTGGACAGCCTTGGCAAACTTGCACCAACAGTGGAGAAAGTGAAGCATGGATTCGGCATGAAAGCACCTAGAGCAGCTACATAA 2721 0.4315 MADSTKVRLVRCPKCENLLPELADYSVYQCGGCGAVLRAKQKGYVSGSLSDEGKGGGDSGKSENSLVKGLVNPPSDTSDVDAKSNSGPSRYDNQRDVDKANNGQEKILNQSEDADEKGFFENDVDVKRNKDEVGKAIGREQEEPKSQIGHENGSKFSGRISNWQNGETSEMEGFRRKHQADMENVRFSTSNYPDEGPSNGYFGFSHNYMEPWRNNKGTDGAKRVQHLEQDRAELLRKLDELKDQLSKSSEVVNNSKEKALPDERMIPPDPHPYGASDPWFSDGSSGLNRTSRQLFGADKHMAGPPHFNYHHDPYPYPSSHEMVVPNFHPSMHNPSQYGDPFASQMLRRGPHQFPQPLHPYFPGRYVDANPDSYELYAHNAMLHPSSCSCFHCYDNKRRGPVPAPPASFINSRFPDTPNDPMLYHHEVPGAFGSHVHNSRTSIPPAPFREKQLHTRWPSDFNSDIGGFVRSRPRKVMVASSSQRCRPVAGGSPFITCNNCFELLQLPEKAVVLVKNQQQKVQCGACSSEISFAIINKKLVISPPSEMKGVSTRGDDSSNEVVSSHVSHSRGHVNRSGANFSSDDYSGYDFLSVDKEPLSLVALNSNNSQEMQSFHSSSPSTSEDEDSPEVMIAPREATKSIHQPTKDSLSPPAGSPLQEYFDYSNNNHAVNRFGKGNRSSRSEQEKTKVDKITSRQNSLKETALATEMDVHDYSNTGVSQDSRDASREHDHPRSNKGGESFFANIIKKSFRDFSRSNQTDGRGKINVTVNGQPLSDRVIKKAEKLAGPIQPGNYWYDFRAGFWGVMGGPCLGIIPPFIEEFNHPMPDKCSGGNTGVFVNGRELHQKDLDLLSGRGLPYDSDRSYIIEISGRVLDEDTGEELDSLGKLAPTVEKVKHGFGMKAPRAAT. 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05548 906 MobiDBLite consensus disorder prediction 109 125 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 65 91 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 150 169 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 138 174 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 721 735 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 606 624 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 658 676 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 545 577 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 606 738 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 46 125 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 677 694 - -
Seca2g05548 906 MobiDBLite consensus disorder prediction 550 577 - -
Seca2g05548 906 Coils Coil 224 258 - -
Seca2g05548 906 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 898 IPR040244 GO:1900150
Seca2g05548 906 Pfam Probable zinc-ribbon domain 488 532 IPR021480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05548 Seca-Chr2 141857224 141861818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05548 - - gmx:100795121 1500.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05548 2 141857224 141861818 Seca2g05548 2 141857224 141861818 ECH