Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05527 ATGAGTTCAATGGCCTCCATCAATATCTTGGTCATTTTTTGGGTTGTGTTGCCTTGCTTGGTCGGTTTAAGCCACTCTGAATGTGATTTCAAGGCAATCTTCAACTTTGGGGATTCAAATTCAGATACTGGTGGCTTTTTTGCAGCTTTTCCTGCACAATCTGGTCCCTTTGGAATGACTTACTTCAACAAACCAGCAGGCAGGGCTTCAGATGGCAGACTCATTATTGATTTTCTTGCTCAAGCTCTTGGATTGCCATTTTTGAGTCCGTATCTGCAATCAATCGGATCTGATTATAGACACGGAGCCAACTATGCTACATTGGCATCTACTGTGCTTCTGCCTAATACTTCTTTGTTTGTTACTGGGATCAGCCCTTTCTCCCTTGCTATCCAGCTCAACCAAATGAAGCAATTTAAAACCAAAGTTGATGAAGCTGGTCAACAAGACACCAAACTTCCTTCACCAGATATATTTGGAAAATCTCTTTACACATTCTATATTGGCCAAAATGATTTCACTTCCAACTTAGCAGCCATTGGCATAGGTGGAGTGCAAGAGAATCTCCCTCAAGTTGTTTCCCAAATTGCTGCAACCATTAAGGAGCTATATAACCTTGGTGGGCGTACATTTATGGTGCTTAATCTTGCACCAGTGGGATGCTACCCTTCATTCTTGGTGGAGCTTCCTCATAATAGTTCAGACCTTGACGATTTTGGATGTTTGGTTTCTTACAACAATGCAGTAGTGGACTATAACAACATGTTGAAAGAGACATTGACACAAACCAGACAGAGTCTTTCTGATGCTTCTGTCATTTATGTGGATACTCACACTGTTCTGTTAGAGCTCTTCCAGCATCCTACTTCTCATGGGCTCCAATATGGTACAAAAGCATGTTGTAAATATGGAGGGGGTGAGTACAACTTCGATCCTAAAGTTTACTGCGGCAATACCAAAGAAATAAATGGCAGCACAGTGGCAGCAACAGCATGCAATGACCCCTACAACCCTTTCTCCCTTGCTATCCAGCTCAACCAAATGAAGCAATTTAAAACCAAAGTTGACGAAGCTGGTCAACAAGACACCAAACTTCCTTCACCAGATATATTTGGAAAATCTCTTTACACATTCTATATTGGCCAAAATGATTTCACTTCCAACTTAGCAGCCATTGGCATAGGTGGAGTGCAAGAGAATCTCCCTCAAGTTGTTTCCCAAATTGCTGCAACCATTAAGGAGCTATATAACCTTGGTGGGCGTACATTTATGGTGCTTAATCTTGCACCAGTGGGATGCTACCCTTCATTCTTGGTGGAGCTTCCTCATGATAGTTCAGACCTTGATGATTTTGGATGCATGGTTTCTTACAACAATGCAGTAGTGGACTATAACAACATGTTGAAACAGACATTGACACAAACCAGACAGAGTCTTTCTGATGCTTCTGTCATTTATGTGGATACTCACACTGTTCTGTTAGAGCTCTTCCAGAATCCTACTTCTCATGGGCTCCAATATGGTACAAAAGCATGTTGTGGATATGGAGGGGGTGAGTACAACTTCGATCCTAAAGTTTACTGCGGCAATACCAAAGACATAAATGGTGGAACAGTGACAGCAGCAGCATGCAATGACCCCAACAACTATGTGAGTTGGGATGGGATACATGCCACAGAAGCTGCAAACAAGCTTATAACCTATGCCATTCTTAATGGATCCTACTCTGATCCTCCTTTCCCATTTCAGGAACGCTGTAATCTTCAACCTATAGGTTGA 1779 0.421 MSSMASINILVIFWVVLPCLVGLSHSECDFKAIFNFGDSNSDTGGFFAAFPAQSGPFGMTYFNKPAGRASDGRLIIDFLAQALGLPFLSPYLQSIGSDYRHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKQFKTKVDEAGQQDTKLPSPDIFGKSLYTFYIGQNDFTSNLAAIGIGGVQENLPQVVSQIAATIKELYNLGGRTFMVLNLAPVGCYPSFLVELPHNSSDLDDFGCLVSYNNAVVDYNNMLKETLTQTRQSLSDASVIYVDTHTVLLELFQHPTSHGLQYGTKACCKYGGGEYNFDPKVYCGNTKEINGSTVAATACNDPYNPFSLAIQLNQMKQFKTKVDEAGQQDTKLPSPDIFGKSLYTFYIGQNDFTSNLAAIGIGGVQENLPQVVSQIAATIKELYNLGGRTFMVLNLAPVGCYPSFLVELPHDSSDLDDFGCMVSYNNAVVDYNNMLKQTLTQTRQSLSDASVIYVDTHTVLLELFQNPTSHGLQYGTKACCGYGGGEYNFDPKVYCGNTKDINGGTVTAAACNDPNNYVSWDGIHATEAANKLITYAILNGSYSDPPFPFQERCNLQPIG. 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05527 592 CDD SGNH_plant_lipase_like 32 335 IPR035669 -
Seca2g05527 592 SUPERFAMILY SGNH hydrolase 374 571 - -
Seca2g05527 592 Gene3D SGNH hydrolase 22 337 IPR036514 -
Seca2g05527 592 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 16 335 - -
Seca2g05527 592 Pfam GDSL-like Lipase/Acylhydrolase 33 306 IPR001087 GO:0016788
Seca2g05527 592 Pfam GDSL-like Lipase/Acylhydrolase 321 568 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05527 Seca-Chr2 141694527 141705958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05527 340 581 Acyl Lipid Metabolism Gene Families AT4G10950 24.900 2.59e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05527 - - gmx:100813037 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05527 2 141694527 141705958 Seca2g05527 2 141694527 141705958 ECH