Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05524 ATGAAGGATTTGAATTCGGATCTATTTGACCCGGGAACGGTTATGGACTCCGATTACTCTCGTGGTGCTTCCTCTTCCGATGCCGATTTCGGCTTCGCTTTCAATGACAGCAATTTCTCCGATAGGATCCTTCGGATCGAGATCATGGATGACCCGGTTGAGGCCCGCCCTGATTCCGAGGGTTGCACCACCATCGCCGACTGGGCTCGCCACCGCAAGAGGAGAAGGGAGGATATCAAGAAGGATAATGTGGTGGATCTCACTTTATTGCCTGATGAGCAAATTTTGAATGGGAATCAACCTGATATGGATGATTTTGTGCCCTGTGAGAATCAAGATGAGGAGGCAGTTGCAATGGTTGAAGAATCCCCTTCAGGTGATGAGGCTGCAAATAACGACAATTCAAACTTGAACATGGATTGCTCTACAGTTGTGAGAGTTAGAACACTACACATCAGTTCTCCTATCTTAGCTGCTAAAAGTCCTTTCTTCTACAAGCTTTTCTCAAATGGGATGAGGGAGTCAGAGCAGAGACATGTTACCTTGAGAATTACTGCTTCTGAGGAAGCTGCTCTCATGGAGCTTCTGAATTTTATGTATAGTAACACCTTGAGCATTACTTCACCACCTGCTTTATTGGATGTGTTGATGGCTGCTGACAAATTTGAAGTTGCTTCATGTATGAGATACTGCAGCCGATTATTGCGGAATATACCTATGACACCTGAGTCTGCATTGCTTTACCTTGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTTCAGCCATTGACTGATGCAGCAAAGCAGTACCTTGCTGGTCGATACAAAGATTTATCAAAGTTCCAGGAAGAGGTTATGGCCTTGCCCCTAGCTGGAGTAGAGGCAATATTGTCTAGTGATGAACTCCAGGTTGCATCAGAGGATGCTGTATATGACTTTGTGTTGAAGTGGGCTCGAACCCAGTACCCAAAATTGGAAGAGAGGAGAGAAGTTCTGGGTACACGGCTTGCCCGATTAATTCGCTTCCCTTACATGACCTGTCGAAAGCTTAAGAAGGTCTTGACCTGTAATGACTTTGACCATGATGTTGCATCCAAGCTTGTACTTGAAGCCCTCTTTTTCAAGGCTGAGGCTCCACACCGCCAACGGATACTAGCTGCTGAGTCTGCTTCCTCCAATCGTCTTTTTGTGGAGCGTGCATACAAATATCGCCCTGTTAAGGTTGTGGAATTTGAACTTCCAAGGCAGCAGTGTGTGGTTTACTTGGATCTAAAGCGGGAGGAGTGTGCCAATTTGTTCCCATCTGGCCGTGTTTATTCTCAGGCATTTCATTTGGGTGGACAAGGGTTTTTCTTATCAGCACATTGCAACATGGACCAACAGAGCTCTTTCCATTGCTTTGGCCTGTTTTTAGGAATGCAGGAAAAGGGCTCTGTTAGCTTTGCTGTTGACTATGAATTTGCTGCAAGGTCTAGGCCAACGGAGGAATTTGTTAGCAAGTACAAAGGCAATTACACATTCACCGGAGGGAAGGCAGTTGGCTATAGAAACTTGTTTGCAATTCCATGGACTTCGTTCATGGCCGAAGATAGTCTTTACTTTATTAATGGCGTACTGCACCTCAGAGCTGAGCTCACCATCAGACACTGA 1653 0.4567 MKDLNSDLFDPGTVMDSDYSRGASSSDADFGFAFNDSNFSDRILRIEIMDDPVEARPDSEGCTTIADWARHRKRRREDIKKDNVVDLTLLPDEQILNGNQPDMDDFVPCENQDEEAVAMVEESPSGDEAANNDNSNLNMDCSTVVRVRTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRITASEEAALMELLNFMYSNTLSITSPPALLDVLMAADKFEVASCMRYCSRLLRNIPMTPESALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDLSKFQEEVMALPLAGVEAILSSDELQVASEDAVYDFVLKWARTQYPKLEERREVLGTRLARLIRFPYMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRILAAESASSNRLFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH. 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05524 550 FunFam BTB/POZ domain-containing protein POB1 273 377 - -
Seca2g05524 550 SUPERFAMILY TRAF domain-like 437 548 - -
Seca2g05524 550 Gene3D Potassium Channel Kv1.1; Chain A 130 258 IPR011333 -
Seca2g05524 550 SUPERFAMILY POZ domain 135 236 IPR011333 -
Seca2g05524 550 Gene3D - 271 377 - -
Seca2g05524 550 ProSiteProfiles BTB domain profile. 139 208 IPR000210 GO:0005515
Seca2g05524 550 SMART BACK_2 254 356 IPR011705 -
Seca2g05524 550 PANTHER OS02G0260700 PROTEIN 16 549 IPR045890 -
Seca2g05524 550 CDD BTB_POZ_ZBTB_KLHL-like 140 222 - -
Seca2g05524 550 Pfam BTB And C-terminal Kelch 262 354 IPR011705 -
Seca2g05524 550 FunFam BTB/POZ domain-containing protein POB1 132 260 - -
Seca2g05524 550 Pfam BTB/POZ domain 137 236 IPR000210 GO:0005515
Seca2g05524 550 SMART BTB_4 139 239 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05524 Seca-Chr2 141680432 141686040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05524 - - gmx:100781329 1046.96