Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05278 ATGGTAGCCCTCATTCTCTTTCTACTAACTAGTCTTGTTCCAGTAATCAATGCATCAACCCTTAGTACTTGTCCTGATTGTGGTGACTCTGCAGTTCCATACCCTCTCAGCACTCACAAGGATTGTGGGGACAAAAGGTACAAAGTCTATTGCAACAATGGCAGCTTAGAATTCTTGTCAGCCACAGGGACTTACTATAAGATCCTTAAAATTGACCCATGTGCTAATAAGCTTGTCATTAGGCCACCCCTTATACTGAAAGACACTTGTTATTCTTCTGATCTCTTTGGAGGAGGCTTTTTGCTTGATGAAAGCTTACCCTTCAATATATCTACACACAATACAGTTATGTTGTTTAATTGTTCTGATAACATCCTTCTGTCTCCTCTGAACTGTTCCTCAAACAGCATATGTAGACAGTTTGAGGAAAAGGTAGAAGAGGGAAGTGGGTGTATGAGCACACTTTGCTGCCATTTCTTAAAAGACTCTGCCATGAATTCCCATAGGATAAGACTCAGGGTTGGGAGTTGCACTGCTTATACTTGTTTGGTGGGTTTCAAGCCTGATGACCCTTTTGATTCTTGGAATTATGGGATTGAGCTGCAATGGCTGCCTCCTAATTGA 624 0.4151 MVALILFLLTSLVPVINASTLSTCPDCGDSAVPYPLSTHKDCGDKRYKVYCNNGSLEFLSATGTYYKILKIDPCANKLVIRPPLILKDTCYSSDLFGGGFLLDESLPFNISTHNTVMLFNCSDNILLSPLNCSSNSICRQFEEKVEEGSGCMSTLCCHFLKDSAMNSHRIRLRVGSCTAYTCLVGFKPDDPFDSWNYGIELQWLPPN. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05278 207 Pfam Wall-associated receptor kinase galacturonan-binding 24 76 IPR025287 GO:0030247
Seca2g05278 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 4 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05278 Seca-Chr2 139291535 139292158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05278 24 207 Receptor kinase-like Gene Family AT5G02070 38.743 5.63e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05278 - - tpra:123890956 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05278 2 139291535 139292158 Seca2g05278 2 139291535 139292158 ECH