Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05274 ATGGACGCTGATTCCTCTTGGAGCTCTCGTCTATCCTCTGCCTCCAAGCGCTACCTTCAATCCCGATCAGAAATGTTCATGGGTTTTGATGAAAACGATGGGGATGATGATATAAGGGAGGAGTTTCTCTGCCCGTTTTGTTCTGAGTATTTTGATATTGTTGGATTATGCTGCCATATTGATGAAGAGCATCCCGTGGAGGCCAAAAATGGGGTCTGTCCCATTTGTGCATTGAGGGTGGGTGTTGATATGGTTGCACACATAACCCTACAACAGGGAAGCATACTTAAGATATCCTTTTCTATTTTAGTTATTATTTATTTGTGCCAACTCCTAAATGAATACATGCAGTGCAAGAGGAAATCACGTAAAAGTGGATCTTATTCAACGCTATCTTTATTGAGGAAGGAGCTGCGAGAAGGAAATTTGCAATCCCTATTTGGTGGGTCCTCGTGTATAGTGTCCTCGACTAATGCAGCACCCGATCCGTTGTTATCATCATTTATATTGCCTGTAGCTGATGAATTTTCCAGTCCTCAGAGACAGCCTAACTTTCTTAGTGAGACAAGGCAATCCAAAAAAAGCTCGGATGAGACTGTATCAAAACAGAATGAGGAGACATCTACCTTATCAGTAGAGGATAAGGAAGAAAAGGCAAAAAGATGTGAGTTTGTTCAAGGGCTATTGCTGTCCACCATGCTTGATGACATCTTATGA 717 0.4198 MDADSSWSSRLSSASKRYLQSRSEMFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPVEAKNGVCPICALRVGVDMVAHITLQQGSILKISFSILVIIYLCQLLNEYMQCKRKSRKSGSYSTLSLLRKELREGNLQSLFGGSSCIVSSTNAAPDPLLSSFILPVADEFSSPQRQPNFLSETRQSKKSSDETVSKQNEETSTLSVEDKEEKAKRCEFVQGLLLSTMLDDIL. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05274 238 PANTHER PROTEIN DEHYDRATION-INDUCED 19 27 235 IPR033347 -
Seca2g05274 238 Pfam Drought induced 19 protein (Di19), zinc-binding 40 92 IPR008598 -
Seca2g05274 238 MobiDBLite consensus disorder prediction 178 218 - -
Seca2g05274 238 Pfam Stress-induced protein Di19, C-terminal 131 233 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05274 Seca-Chr2 139261895 139265427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05274 - - gmx:100795155 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05274 2 139261895 139265427 Seca2g05274 2 139261895 139265427 ECH
Seca2g05085 2 137346351 137349083 Seca2g05274 2 139261895 139265427 ECH
Seca2g05274 2 139261895 139265427 Seca2g05085 2 137346351 137349083 ECH