Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05235 ATGGGTGGCACTAGGTTTATTGGTGTGTTTTTGTCTAGGCTCCTTGTTAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGAAAAGCGCCTATCTCTCAACAATTGCCAGGTGAATCAGACAGTGACTATGTTGAGTTTTCATCCAAGATCTTGCATTTGAAAGGAGATAGGAAGGACTTTGACTGTGTAAAATCCAGTCTCTCAGCAGCAGGGTTTGATGTTGTTTATGACATAAATGGACGAGAGGCCAGTGAAGTTGAACCCATACTGGACGCTTTGCCAAATCTGGAACAGTTCATTTACTGCTCTTCAGCTGGTGTCTATCTCAAATCTGATTTATTACCTCATGCTGAGACTGATGCAGTTGATCCTAAGAGCAGGCACAAGGGAAAGCTTGAGACAGAGAGCTTGCTGCAATCAAAGGATGTTAACTGGACTTCTATAAGGCCAGTCTACATCTATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCACAGATTGAAAGCTGGTCGCCCTATTCCCATTCCCAGCTCAGGAATACAGATAACACAACTTGGTCATGTTAAGGATTTGGCGAAAGCTTTTATTCAGGTTCTTGGTAATGATAAGGCCAGCAAGCAAATATTCAACATCTCAGGAGAGAAGTATGTCACGTTTGATGGATTAGCAAGAGCATGTGCTAAGGCTGGTGGGTTCCCAGAGCCAGAGATCATTCACTACAACCCTAAAGATTATGATTTTGGGAAAAGCAAGCCATTTCCATTCCGTGACCAGGTGAAAAGACTAAAAAAAATCAGAAAGGGGCTGGGGGGAGTGGATGTAACTTGGCTATTCTATAAGAAAACAGACTTTAGTATATAG 873 0.4273 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDSDYVEFSSKILHLKGDRKDFDCVKSSLSAAGFDVVYDINGREASEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLAKAFIQVLGNDKASKQIFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDYDFGKSKPFPFRDQVKRLKKIRKGLGGVDVTWLFYKKTDFSI. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05235 290 Gene3D - 1 273 - -
Seca2g05235 290 CDD SDR_a1 1 248 - -
Seca2g05235 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 246 IPR036291 -
Seca2g05235 290 Pfam NAD dependent epimerase/dehydratase family 1 215 IPR001509 -
Seca2g05235 290 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 241 - -
Seca2g05235 290 FunFam Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05235 Seca-Chr2 138842573 138847326 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05235 - - gmx:100791076 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05235 2 138842573 138847326 Seca2g05235 2 138842573 138847326 ECH