Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05231 ATGAGTTGTGGCGGTGATTCTCAGTCTCAAAGTGTGTCACCATTATCACTCTCACTGCACCGATGGATGCTCCTACTCTCTCTATGGACGCTATCTTCATTTCCTTCTTCATCTTTGGCCGTGAGTAAATGCGATAAGCCTGCAGTGCTATTCGTGTTCGGCGATTCCAACTCGGACACGGGTGGACTCGCCTCTGGACTCGGTTTCCCCATCAATCTTCCAAATGGCCGCACTTTCTTCCACAGATCCACTGGTCGCTTGTCCGATGGACGCCTCGTCATTGACCTACTCTGCCAAAGTTTGAATATAGGACTTTTGAATCCATACTTGGACGCCTTGTCTGGATCCACATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACCCTTCCCAAATATGTTCCTTTCTCTTTAAATATACAGGTCATGCAGTTCCAGCATTTCAAAGCTCGTAGCCTTCAACTTGTTAACGCAGGTGCAAGAAATTTGATCAATGATGAAGGCTTCAGGGATGCACTCTACTTGATTGATATTGGGCAAAACGACCTTCATGATTCATTTTCCAAAAATCTAACATACACTCAAGTCGTCAAGAGGATCCCATCAGTTATCACTGAAATTGAGAATGCTGTTAAGGTCAGTATACTGTTCTTTAAATTGTTGAAGAAATTTGCTTATCATGTATGA 693 0.4401 MSCGGDSQSQSVSPLSLSLHRWMLLLSLWTLSSFPSSSLAVSKCDKPAVLFVFGDSNSDTGGLASGLGFPINLPNGRTFFHRSTGRLSDGRLVIDLLCQSLNIGLLNPYLDALSGSTFTNGANFAVVGSSTLPKYVPFSLNIQVMQFQHFKARSLQLVNAGARNLINDEGFRDALYLIDIGQNDLHDSFSKNLTYTQVVKRIPSVITEIENAVKVSILFFKLLKKFAYHV. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05231 230 Gene3D SGNH hydrolase 44 224 IPR036514 -
Seca2g05231 230 Pfam GDSL-like Lipase/Acylhydrolase 50 214 IPR001087 GO:0016788
Seca2g05231 230 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 34 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05231 Seca-Chr2 138807748 138812424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05231 37 197 Acyl Lipid Metabolism Gene Families AT4G10950 29.775 3.14e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05231 - - gmx:100790553 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05231 2 138807748 138812424 Seca2g05231 2 138807748 138812424 ECH