Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05193 ATGAGGGATTCTGTGTGCAAAGTGAATGCATGCTTCAACAGCCTGATTGTCATACTATGGAACTGTTATCCTAATGCAAATGATTTTGGATCCGAGGTCATTCCAATGGCTGCAAAAGATTTTAATGTCCAGGCATGTCTTTTCAATGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCGAACTTGGCTCTTATGGATCAGCCACCCAAGTTTCAGTTGTATGACCAGTCAAAGCCTATTTTTACATGTCCTCGGTTCCTACCACCAACTAAAATGGAGAAGTGCCAGGTAATTAATTCTTTGATTTCAGATGGTTGCTTTCTAAGAGAGTGCATTGTTGAACATTCCATTGTGGGAATTCGCTCAAGACTTGATTCTGGAGTGCAGCTAAAGGATACCATGATGATGGGTGCCGACTATTACCAAACAGAGGCTGAAATAGCTGCTCTTTTAGCATCCGGAAATGTTCCAATAGGCATTGGTAAAGATTCCAAAATCAAGAATTGTATAATTGACAAAAACGCCAGAATTGGAAACAATGTAATAATTGCAAACAAAGAAGCCCCAAATCTTAACCAGACCAAAGGCCTGATGGTGACTCAAGTAAAAGAAAAGCAGCCATTATTATTTTATTTCCGGATGCAGAATGTGCAGGAGGCAGACAGACCCTGTGAAGGGTTTTATATTCGATCAGGGATCACGGTGGTGTCAAAAGACTCTGTAATAAGGGATGGTTCAATCATTTAA 759 0.3979 MRDSVCKVNACFNSLIVILWNCYPNANDFGSEVIPMAAKDFNVQACLFNGYWEDIGTIKSFFDANLALMDQPPKFQLYDQSKPIFTCPRFLPPTKMEKCQVINSLISDGCFLRECIVEHSIVGIRSRLDSGVQLKDTMMMGADYYQTEAEIAALLASGNVPIGIGKDSKIKNCIIDKNARIGNNVIIANKEAPNLNQTKGLMVTQVKEKQPLLFYFRMQNVQEADRPCEGFYIRSGITVVSKDSVIRDGSII. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05193 252 Pfam Nucleotidyl transferase 22 69 IPR005835 GO:0009058
Seca2g05193 252 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 89 IPR029044 -
Seca2g05193 252 SUPERFAMILY Nucleotide-diphospho-sugar transferases 25 123 IPR029044 -
Seca2g05193 252 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 15 252 IPR011831 GO:0005978|GO:0008878
Seca2g05193 252 Gene3D Hexapeptide repeat proteins 90 208 - -
Seca2g05193 252 Gene3D Hexapeptide repeat proteins 216 252 - -
Seca2g05193 252 CDD LbH_G1P_AT_C 92 246 - -
Seca2g05193 252 SUPERFAMILY Trimeric LpxA-like enzymes 88 252 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05193 Seca-Chr2 138401152 138403933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05193 K00975 - gmx:100786313 371.703