Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05169 ATGAGAAGTCATGGTAGGTTAATTGTTTGCCGTTATCTTTCTCGGTTGCGGCAGCAATTTGAATCAAACTCCGAACTCCAACTCCGGCTTCGTCCTCCATTTTTGCTTCGTTCTTATTCTGCCGAAGTGCAACCTCAACTGTCCCCGGACCTCTTAAACATAATGGAACAAAGACTCTCAGCTATTGAGTACAGGACTGCTTGTCTTAACAATCTTCTTAATCAGCCAGAAGCATCACCGGCAGAGTATGCGAGAGCTAATAAGGAGCTTCGAAAGCTGAGTGGTTCCGTGGAACTTATTAATGAATTGAGGGCCAAACAGAAGCTTTTTTACTATTTGCAGGAAATTGATGGCTTGAAATCACTAATGACTGAATGTTCGGAAGACAAAGACATGCTTAATATGGCAACAGAGGAAATGGGCCAGGCCATTGAGGAAGAAAGAAGACTACAAAATTTGCTGCTGAAGTCATTACTTCCTAAGGACGATGCTGATGAAAGGGATTGCATTTTGGAGGTGCGAGCAGGCACTGGTGGGGAGGAGGCCTCCTTGTTTGCGATGGATATCTTTAAAATGTATGAGAAGTATGCTCACAAGAAAGGCTGGAAGTTTGAAGTGGTGGATATAGCTCAATCTGATCTTAAAGGATACAAGGAGGCTAGTGCAGCAATTGCAGGAGCCGGTGTTTTTGGGAAACTAAAATTTGAGAGTGGAATTCATAGAGTACAGCGAGTTCCTGTGACAGAAAAGTCGGGACGTGTTCATACCAGTGCTGTTTCTGTTGCAATCCTCCCTCAAGCTGATGAGGTCGATGTTCAATTGAAGAATGAAGACTTAAAAATCGATACCTATAGATCTGGTGGTTCAGGTGGTCAGCATGCAAATACAACCAATAGTGCAGTTAGAGTAACTCACATTCCAACAGGGATTATGGTTGCTATACAAGATGAGCGTTCTCAGCATATGAACAAGGCCAAAGCTCTCAAGGTACTATGTGCAAAGCTATATGAAATGGAAAGGCTCAGACTTCACAGTAGTCGATCAAAGCTTCGATCGGAGCAGATTGGTAGTGGGGACAGATCTGAACGCATCCGAACATACAATTTTCCTCAAGGACGTGTAACTGATCATAGAGTTGGTATCACTTATCACTCAATAGAAGATGTGATGCAAGGAGAGAATCTTGATGTCTTCGTTGATGCTCTTCTATTGCAAGAAGAAATGGATGCAATTTCAACTTTCAGTTCTTCTCAGTAA 1257 0.4272 MRSHGRLIVCRYLSRLRQQFESNSELQLRLRPPFLLRSYSAEVQPQLSPDLLNIMEQRLSAIEYRTACLNNLLNQPEASPAEYARANKELRKLSGSVELINELRAKQKLFYYLQEIDGLKSLMTECSEDKDMLNMATEEMGQAIEEERRLQNLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAHKKGWKFEVVDIAQSDLKGYKEASAAIAGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRVTHIPTGIMVAIQDERSQHMNKAKALKVLCAKLYEMERLRLHSSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIEDVMQGENLDVFVDALLLQEEMDAISTFSSSQ. 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05169 418 Coils Coil 133 153 - -
Seca2g05169 418 NCBIfam peptide chain release factor 1 56 414 IPR004373 GO:0006415|GO:0016149
Seca2g05169 418 Hamap Peptide chain release factor 1 [prfA]. 55 415 IPR004373 GO:0006415|GO:0016149
Seca2g05169 418 Gene3D - 275 363 - -
Seca2g05169 418 SMART PCRF_a_2 121 236 IPR005139 GO:0006415
Seca2g05169 418 FunFam Peptide chain release factor 1 165 275 - -
Seca2g05169 418 Gene3D - 50 163 - -
Seca2g05169 418 Pfam PCRF domain 64 261 IPR005139 GO:0006415
Seca2g05169 418 Pfam RF-1 domain 268 378 IPR000352 GO:0003747|GO:0006415
Seca2g05169 418 Gene3D - 169 394 - -
Seca2g05169 418 PANTHER LD18447P 51 415 - -
Seca2g05169 418 SUPERFAMILY Release factor 79 406 IPR045853 -
Seca2g05169 418 FunFam Peptide chain release factor 1 267 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05169 Seca-Chr2 138149563 138154463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05169 K02835 - gmx:100800412 692.189