Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05167 ATGGATGTCAATGAGGCCAGAATCTTGCTGGGTTTCCCACCCAATTCGCGCCCAACTCCTTCACAGGTCAAATCAGCTTACAAAAAGAAGGTGTGGGAATCTCACCCTGACCTATTTCCATCTCATGAGAAGCCTCTTGCTGAGTCTAGGTTTAAACTGATTTCAGAAGCTTACACATGTCTCCTGCCTGGTAATTCTCCAGACCCCGTGTACTTGTAG 219 0.4703 MDVNEARILLGFPPNSRPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESRFKLISEAYTCLLPGNSPDPVYL. 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05167 72 SMART dnaj_3 4 66 IPR001623 -
Seca2g05167 72 Gene3D DnaJ domain 4 66 IPR036869 -
Seca2g05167 72 PANTHER DNAJ HOMOLOG SUBFAMILY B 5 61 - -
Seca2g05167 72 CDD DnaJ 9 58 IPR001623 -
Seca2g05167 72 ProSiteProfiles dnaJ domain profile. 5 72 IPR001623 -
Seca2g05167 72 Pfam DnaJ domain 10 61 IPR001623 -
Seca2g05167 72 SUPERFAMILY Chaperone J-domain 9 62 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05167 Seca-Chr2 138140625 138142040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05167 - - ccaj:109795711 126.331