Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05161 ATGGCGGAAACCTTTTTGTTCACTTCTGAATCTGTAAACGAGGGTCACCCTGACAAGCTGTGTGACCAGATCTCCGATGCAGTGCTCGATGCCTGCCTTGAACAGGATCCTGACAGCAAGGTTGCCTGTGAGACATGCACCAAGACTAACATGGTCATGGTCTTTGGAGAGATCACAACCAAGGCCAACGTAGACTATGAGAAGATTGTGCGTGACACATGCCGTAACATTGGATTTGTCTCTGATGATGTGGGTCTTGATGCTGACAAGTGCAAGGTCTTGGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAGGGTGTGCATGGCCACTTTACCAAGCGCCCTGAGGAGATTGGTGCTGGTGACCAGGGTCACATGTTTGGGTATGCCACTGATGAAACCCCTGAATACATGCCATTGAGCCATGTCCTTGCAACCAAACTAGGAGCTCGCCTTACTGAGGTCAGGAAGAATGGTACCTGTGCTTGGCTGAGACCGGATGGTAAGACACAAGTAACCGTTGAGTACTACAATGAAAATGGTGCTATGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCCACCCAACATGATGAGACTGTCAGTAATGATCAAATTGCTGCTGATCTTAAAGAGCATGTTATCAAGCCTGTCATTCCTGAGAAGTACTTAGATGAGAAGACCATCTTTCACCTTAACCCTTCTGGCCGCTTTGTCATTGGTGGTCCCCATGGTGATGCTGGTCTCACTGGAAGAAAGATTATCATTGATACTTATGGTGGCTGGGGTGCCCACGGTGGAGGTGCCTTTTCAGGCAAGGACCCTACCAAGGTTGACAGAAGTGGTGCCTATATTGTGAGGCAGGCAGCAAAGAGTGTTGTGGCAAATGGCCTTGCCCGCAGGTGCATTGTTCAAGTTTCTTATGCAATTGGTGTCCCTGAACCCTTGTCAGTCTTTGTTGACACTTATGGAACTGGAAAGATTCCTGACAAGGAGATCCTTCAAATTGTGAAGGAGAATTTCGACTTCAGACCTGGAATGATCACCATTAACTTGGACCTTAAGAAGGGTGGCAACAGGTTTCTCAAGACAGCTGCCTATGGACACTTTGGAAGGGATGACCCAGACTTCACCTGGGAAGTTGTGAAGCCACTCAAGTGGGAGAAGCCTCAAGCTTAA 1182 0.4822 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKENFDFRPGMITINLDLKKGGNRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05161 393 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Seca2g05161 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Seca2g05161 393 Gene3D - 118 381 - -
Seca2g05161 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Seca2g05161 393 Gene3D - 5 243 - -
Seca2g05161 393 FunFam S-adenosylmethionine synthase 138 242 - -
Seca2g05161 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Seca2g05161 393 Gene3D - 12 280 - -
Seca2g05161 393 SUPERFAMILY S-adenosylmethionine synthetase 241 390 IPR022636 GO:0004478|GO:0006556
Seca2g05161 393 Hamap S-adenosylmethionine synthase [metK]. 3 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Seca2g05161 393 FunFam S-adenosylmethionine synthase 118 137 - -
Seca2g05161 393 CDD S-AdoMet_synt 6 384 - -
Seca2g05161 393 FunFam S-adenosylmethionine synthase 263 381 - -
Seca2g05161 393 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Seca2g05161 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Seca2g05161 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 381 IPR022630 GO:0004478|GO:0006556
Seca2g05161 393 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Seca2g05161 393 FunFam S-adenosylmethionine synthetase 1 12 117 - -
Seca2g05161 393 NCBIfam methionine adenosyltransferase 6 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
Seca2g05161 393 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05161 Seca-Chr2 138097442 138098623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05161 K00789 - gmx:100777770 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06527 8 159742656 159745036 Seca2g05161 2 138097442 138098623 ECH
Seca2g05161 2 138097442 138098623 Seca2g05161 2 138097442 138098623 ECH