Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05150 ATGGCTGCGATCGTGAGAGCGCACGTGTTCAGTGTTGTGAGTTTTCAGCTCAAAGAAGCAGGAATGCCTTTTGCATGTTCCAGCGTAATTCGCAAGCGTTTAGGAGATTGTGCTCCTCAGCGCAATGTGACCCTAAGACGCAAAGGAAATGCTGCGATTCTTCCCAAAGTCAGAGCCCAGAATCTTCCTGACTATGTTCCAGATTCCAAGTTTTACAAAGTGGAAGCCATTCTCAGATTTGGAATATCTTCGCTGCTTTTAATTATGCTGTTAAATTTCTTGTGGAGCAGGCCCTGGCGAGTCCCTCAAGTTTCCTCGGCCTTGCTGAAAATGGGGATTCGTGGTGTCACTGTATCTGATGCCAGGGGTTTTGGTGCTCAGGGTGGTTCAAAAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTGGTGAGAAAGGACCAGGTTGAGGCAGTAATAGACAAAGTTATTGAGGAGGCAAGGACTGGGGAGATCGGTGATGGCAAAATCTTCTGTAAGGCCTAA 555 0.4631 MAAIVRAHVFSVVSFQLKEAGMPFACSSVIRKRLGDCAPQRNVTLRRKGNAAILPKVRAQNLPDYVPDSKFYKVEAILRFGISSLLLIMLLNFLWSRPWRVPQVSSALLKMGIRGVTVSDARGFGAQGGSKERQGGSEFSEDNFVAKVKMEIVVRKDQVEAVIDKVIEEARTGEIGDGKIFCKA. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05150 184 SMART P_II_3 97 181 IPR002187 GO:0006808|GO:0030234
Seca2g05150 184 SUPERFAMILY GlnB-like 97 182 IPR011322 -
Seca2g05150 184 ProSiteProfiles P-II protein family profile. 89 184 IPR002187 GO:0006808|GO:0030234
Seca2g05150 184 Pfam Nitrogen regulatory protein P-II 97 182 IPR002187 GO:0006808|GO:0030234
Seca2g05150 184 PANTHER NITROGEN REGULATORY PROTEIN P-II 47 182 IPR002187 GO:0006808|GO:0030234
Seca2g05150 184 Gene3D - 95 183 IPR015867 -
Seca2g05150 184 PRINTS P-II protein signature 172 184 IPR002187 GO:0006808|GO:0030234
Seca2g05150 184 PRINTS P-II protein signature 111 129 IPR002187 GO:0006808|GO:0030234
Seca2g05150 184 PRINTS P-II protein signature 141 164 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05150 Seca-Chr2 137947061 137951318 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05150 - - gmx:100775624 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05150 2 137947061 137951318 Seca2g05150 2 137947061 137951318 ECH