Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05140 ATGGCGGCTCTAACCTCAATTTGTTCAATAACCAGATTGAGTGCTCAACAAAAGCAACACCATGGCCTTCCACTAAATTCGGCAGTTTTCAATTTCATATCTATGAAGCAAAAGAGAATCCCTTCTTCACTCCGATTGGCCCAGAATCAGTCTTCTCCTGGACTGTACTCTGCCCAGAGATTTGACCTCACCGTTTCAAACGTCGACCTCGTTCTCGACGATGTTCGCCCTTACCTCATCGCCGACGGTGGCAACGTCGACGTCGTCTCCGTTGAAGACGGCGTTATATCTCTCAGGCTCCAAGGAGCATGCGAAAGTTGCCCTAGCTCAACCACAACGATGAAAATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGAGATGCGGTCAAGGATATAGTGCAAGTATACGACGGTGATGGTCAACCAACGGAGACAACAGTGGAGGCTGTGAATAATCATCTTGAGATATTGAGACCGGCCATAAAGAATTATGGAGGCAGCGTTGAAGTATTATCTGTGGAAGGTGGGGAATGCCATGTGAAGTATATTGGTCCTGAGTCCATTGGATCAGGAATCAAAGCAGCTATCAAGGAGAAGTTTCCAGATATTCTCAATGTTACCTTCTCCACCTCCTAG 639 0.4695 MAALTSICSITRLSAQQKQHHGLPLNSAVFNFISMKQKRIPSSLRLAQNQSSPGLYSAQRFDLTVSNVDLVLDDVRPYLIADGGNVDVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIVQVYDGDGQPTETTVEAVNNHLEILRPAIKNYGGSVEVLSVEGGECHVKYIGPESIGSGIKAAIKEKFPDILNVTFSTS. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05140 212 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 57 209 - -
Seca2g05140 212 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 65 137 IPR034904 -
Seca2g05140 212 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 144 209 IPR034904 -
Seca2g05140 212 Pfam NifU-like domain 68 128 IPR001075 GO:0005506|GO:0016226|GO:0051536
Seca2g05140 212 FunFam NifU-like protein 3, chloroplastic 60 143 - -
Seca2g05140 212 FunFam NifU-like protein 1 chloroplastic 146 209 - -
Seca2g05140 212 Gene3D - 60 144 IPR034904 -
Seca2g05140 212 Gene3D - 145 209 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05140 Seca-Chr2 137842880 137844283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05140 K22074 - gmx:100527356 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05140 2 137842880 137844283 Seca2g05140 2 137842880 137844283 ECH