Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05135 ATGGCAAATAGACCGGATCCAGATATTGATGATGATTTTCGTGAGCTTTATAAGGAATACACTGGCCCTCTGGGATCTGCTACTACAAATACCCAAGAGAGGGCAAAATCAAACAAAAGGTCTAATGCAGGGTCTGACGAGGAGGAGGAACCTCGGGACCCTAATGCTGTCCCTACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAAGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAGGAAATGATCTGCAAACTCTGTGGAGAATCAGGGCATTTTACTCAGGGTTGTCCATCTACCCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTCGAAAGGATACCTGCAAGAGACAAACATGTAAGATCACTTTTTACAGATAAAGTTATAAGCAAGATTGAAAGGGATATTGGCTGCAAAATCAAGATGGATGAGAAGTTTATTATTGTTAGCGGCAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTAGAGAGGAGGGTGATCAAAAGGGATCTTCTAGTTCTCACATGAACAGATCAAGGTCGCCTGAGAGAAGTCCTGTGAGTGTGCGGTTTCAACGCTCTGAGCCCCAAAGATCTCATTCTGGACCACGGAATACATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGCTGTTGAAGACCGTGTCCGTGAGGACACTCAAAAGTTTGCAAGAGGTTCACCACAAGGTAGGGACAGCATAGGATATCTTTACGGCATCCTTAGAAAGCTGTGCTTAACATACTCTTCATTTCATGAAGCTTATGGAAATAGTGGAGCTAGAGGTCGGTCAAGCCAGTCAAGATCTCCAAGACAGGCCCCTTATACAGGGAACTCATATAATTCATTTGATGGCCGTAATCAAAACATGGCTACTTATAGGAATGATGGGTGGGATTCTCATAGAAGAGAATCTGGTATCCAACCCAGTCATCAGTTTGATCACAGTGCCTCCCCTCAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAACGAGGCAATGGAGCTAATGAAAAATCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAGCAAAGTTGCTTTGATGAGGGCCACACACACAAAACAATGGGAAGACTTTCTTCAGCTTGATGCCCAGAGGCATCAACAGCATGCAATCCAACCAATGTCTTCTGGATATCGGGGTTATAAACAGCAGAATTTTGCCGAATATGATGGGTCCACTGTTAACCCTCCCTATCCAGGAACCAATTTACCCTTGGAATTGAGGAACAGGTTCTCAGACACTATGGACAATTATCCTTCAAGGCCTCATGATAGTTTTGGTGAATTTCAGAGGCGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1455 0.4316 MANRPDPDIDDDFRELYKEYTGPLGSATTNTQERAKSNKRSNAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKHVRSLFTDKVISKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQKGSSSSHMNRSRSPERSPVSVRFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRVREDTQKFARGSPQGRDSIGYLYGILRKLCLTYSSFHEAYGNSGARGRSSQSRSPRQAPYTGNSYNSFDGRNQNMATYRNDGWDSHRRESGIQPSHQFDHSASPQTLEELELEYKNEAMELMKNRDREEDEENFKHREAIRDLREKYMSKVALMRATHTKQWEDFLQLDAQRHQQHAIQPMSSGYRGYKQQNFAEYDGSTVNPPYPGTNLPLELRNRFSDTMDNYPSRPHDSFGEFQRRGDFAKAYNRY. 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05135 484 MobiDBLite consensus disorder prediction 23 38 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 184 226 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 277 315 - -
Seca2g05135 484 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Seca2g05135 484 MobiDBLite consensus disorder prediction 175 249 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 227 245 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 39 55 - -
Seca2g05135 484 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Seca2g05135 484 Coils Coil 342 366 - -
Seca2g05135 484 PANTHER OS01G0252900 PROTEIN 1 484 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 1 18 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 277 339 - -
Seca2g05135 484 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05135 Seca-Chr2 137796881 137801614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05135 - - gmx:100806099 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05135 2 137796881 137801614 Seca2g05135 2 137796881 137801614 ECH