Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05129 ATGTCGATCAGAGACGCTTTTCTGTGCTTACTATTCATCGCAACTTATTCGATTTCAGTCGCTTCTGCTGATTCCATCTATGGCTGCGGTGGATTTGTCCAGGCGAGCTCATCGTTGGTGAAGTCGAGGAAACAAACTGATGCCAAATTGGACTATTCACAAGTCACGGTTGAGCTTCAAACAGTGGATGGACTGGTAAAGGACAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATACGACAAGGGTTCCTTTGTAATTAAAGTTAATGGACCTGAAGGATGGTCATGGGATCCAGAAAAGGTTCCTGTGGTAGTTGACAATCAAGGTTGCAATAGCAATGAAGATATAAATTTTCGTTTCACAGGGTTTACTATATCTAGTAGAGTTGTGGGAGCTGTAGGTGGAGAAAGCTGTTCAGTTAAAAATGGAGGTCCTTCGAATGTTAAAGTTGAACTGTTGTCTCCTTCTGGGGATCTTGTTTCTTCAGTCTTAACTTCACCATCAGGGAGTTACTTGTTTACAAATATAATTCCAGGAAAATATGAACTACGTGCTTCCAATCCTGATATGAAAGTTGAAGTTAAAGGTTCAACGCAGGTGGAATTGGGCTTTGGAAATGGGGTAGTTGATGATGTTTTCTTTGTCCCTGGGTATAGTATCAGTGGGTTTGTTGTTGCTCAGGGAAATCCAATATTAGGAGTCCATATTTTCTTATATTCAGATGATGTGTCTGAGGTAGAATGTTTGCAAGGTTCTGCTAATGGCCCACGACAAGGAGTAGCTCTCTGTCATGCTGTATCAGATGCTGATGGAAAGTTCACATTCAATTCAATTCCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCGCCATCCAGTGTCTCAGTGAATGTTAAGCATCAACATGTAACAGTGCCTCAAAAATTTCAGGTAACGGGATTTTCTGTTGGAGGCCGTGTAGTTGATGGATATGACCTGGGAGTGGAGGGTGTTAAGATCATAGTTGATGGTCATGAAAGGTCTATTACTGACAATCAAGGATATTACAAGCTTGATCAGGTTACGTCCAAGCACTATTCCATAGAGGCCCGAAAGGAGCATTACAAATTCAAGAAGTTGGAGAATTACATGGTATTGCCCAATATGGCTTCAATAGAAGACATTAGTGCCATCTCATATGATCTCTGTGGGTTAGTTAGGATGGTTAGTACTGGTCAGAAAGCAACGGTGGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAACAAACAGATGGAAATGGAAAGTTCTGCTTTGAGGTTCTGCCTGGTGAATATCGCTTGTCAGCTATTGCTGCTACTCCTGAGAATGCTGCTGGACTCTTGTTTGCTCCATCTTATATCGATGTTGTGGTCAAAAGTCCATTGTTGAATGTTGAATTTTCACAGGCTCTGGTCAATGTTCGTGGTGCTGTAGCCTGCAAGGAGAAATGTGGTCCATCTGTATCTGTTACTCTCGTTAGACAGGTTGATAAACATAATGAAGAGAGGAAGACAATTAGCTTGACCACCGAGAGCAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACATAATTCCCCTGAATCAGTGACCACGGAAGATAATTGGTGTTGGGAGCAGAGTTTCTTAGATGTAAGTGTTGGAGCTGAGGACTTAGATGGAATTTTGTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCATGATGTTGATGGTTACATGACTCAACCAGATGGATCAACTGTGAATTTGAAGATTCGGAAAGGTTCCCAACGTATATGTGTTGAATATCCTGGAGTACATGAATTTAGTTTTATTGACTCATGTATCTTCTTTGGGAGCTCGCCTGTGAAAATAAATACATCTAATCTATCGCCAATCCATCTAAAAGGAGAAAAGTATCTTCTTAAAGGACAAATAAATGTGCAGTCTGGCTCACTTGATGTGTTGCCTGAGAAAATAGTTGTTGATATTTATCATGATGGAGCTGGTGTTATTGATAATGCTACAGCCATACTTAAGTCTCATGAGAAAGATCAAACAAATGCTGCTGTATTCGAGTATTCTGTTTGGGCCAATCTAGGAGAAAAGCTTGTCTTTGTTCCTCGGGACTCAAGAAATGATGAGGAGAAAAAACTTTTATTTTATCCTAGAGAACATCATGTATCAGTGACAGATGATAATTGTCAAGCTTATATTCCTACATTTTCTTGTCGACTGGGTGTATATATTGAAGGATCAGTGTCGCCTCCTCTTTCTGGGGTTCATATTAGGATTTTTGCTGCTGGAGACGGCAGCGTCACTGGATTTAAAAGCGGGGACTTAGTACTTGAAACAACCACTGGAACTGATGGATCCTTTGTAGCTGGTCCTCTGTATGATGATGTTGGTTACAATGTTCAGGCTTCAAAGCCTGGTTATCATTTAAAACAAGTTGGACCTTATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCAGTACACATACATCACAAAGATGATGCTAAAGAACTCATTCCTTCCGTTCTGTTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCAGTATCTGGGGCTGGAGGGACATTCCTTTTCGATAATTTGTTTCCTGGAATTTTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCGGCACAGGCGATAGAGCTTGGATCAGGGGAGTTTAAAGAAGTTATTTTCCAGGCCACACGTGTAGCTTACAGGTTTCATTTTGTTATTTCACCCAAATTACCTTTCTATCATACAACTGAAAGCAATCATCAATAA 2892 0.4021 MSIRDAFLCLLFIATYSISVASADSIYGCGGFVQASSSLVKSRKQTDAKLDYSQVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKVNGPEGWSWDPEKVPVVVDNQGCNSNEDINFRFTGFTISSRVVGAVGGESCSVKNGGPSNVKVELLSPSGDLVSSVLTSPSGSYLFTNIIPGKYELRASNPDMKVEVKGSTQVELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHIFLYSDDVSEVECLQGSANGPRQGVALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPSSVSVNVKHQHVTVPQKFQVTGFSVGGRVVDGYDLGVEGVKIIVDGHERSITDNQGYYKLDQVTSKHYSIEARKEHYKFKKLENYMVLPNMASIEDISAISYDLCGLVRMVSTGQKATVALTHGPDNVKPQKKQTDGNGKFCFEVLPGEYRLSAIAATPENAAGLLFAPSYIDVVVKSPLLNVEFSQALVNVRGAVACKEKCGPSVSVTLVRQVDKHNEERKTISLTTESSEFLFSDVIPGKYRLEVKHNSPESVTTEDNWCWEQSFLDVSVGAEDLDGILFVQKGYWVNVISTHDVDGYMTQPDGSTVNLKIRKGSQRICVEYPGVHEFSFIDSCIFFGSSPVKINTSNLSPIHLKGEKYLLKGQINVQSGSLDVLPEKIVVDIYHDGAGVIDNATAILKSHEKDQTNAAVFEYSVWANLGEKLVFVPRDSRNDEEKKLLFYPREHHVSVTDDNCQAYIPTFSCRLGVYIEGSVSPPLSGVHIRIFAAGDGSVTGFKSGDLVLETTTGTDGSFVAGPLYDDVGYNVQASKPGYHLKQVGPYSFSCQKLSQISVHIHHKDDAKELIPSVLLSLSGDNGYRNNSVSGAGGTFLFDNLFPGIFYLRPVLKEYAFSPPAQAIELGSGEFKEVIFQATRVAYRFHFVISPKLPFYHTTESNHQ. 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05129 963 SUPERFAMILY Cna protein B-type domain 864 921 - -
Seca2g05129 963 FunFam Carbohydrate-binding-like fold 143 215 - -
Seca2g05129 963 Gene3D - 335 405 - -
Seca2g05129 963 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Seca2g05129 963 Gene3D Immunoglobulins 139 220 IPR013783 -
Seca2g05129 963 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 21 943 - -
Seca2g05129 963 SUPERFAMILY Starch-binding domain-like 218 297 IPR013784 GO:0030246
Seca2g05129 963 SUPERFAMILY Cna protein B-type domain 146 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05129 Seca-Chr2 137723121 137737808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05129 K26500 - gmx:100815384 1699.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05129 2 137723121 137737808 Seca2g05129 2 137723121 137737808 ECH