Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05115 ATGGCAACAATAGCTGGTCTTAGCCTTTCAAGCCCCCGGGTTGTTTTCAACGCATCCGGCTCGCCGCAAAATGCCCAACCCATCAAGATCCAGCCACTGCGAACGCGTCCGGGTTTGTTCGGTTCGGGTCGATTGGCGATAGTTCGACCCGTTCGCGCTGCGCCGGATAGGATTTCGGAGAAGGTGGAGGAGAGCATAAAGAATGCACAGGAGACTTGCGCGGATGACCCTGCCAGCGGCGAATGCGTGGCGGCGTGGGATGAGGTGGAGGAGCTGAGCGCGGCGGCCAGCCATGCAAGGGACAAGATGAAGGAGTCCGACCCGCTGGAAGATTTCTGCAAGGACAACCCGGAGACTATTGAGTGCAAAACTCATGATAACTGA 384 0.5755 MATIAGLSLSSPRVVFNASGSPQNAQPIKIQPLRTRPGLFGSGRLAIVRPVRAAPDRISEKVEESIKNAQETCADDPASGECVAAWDEVEELSAAASHARDKMKESDPLEDFCKDNPETIECKTHDN. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05115 127 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 127 IPR039314 -
Seca2g05115 127 MobiDBLite consensus disorder prediction 98 127 - -
Seca2g05115 127 SMART CP12_2 58 127 IPR003823 -
Seca2g05115 127 Pfam CP12 domain 58 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05115 Seca-Chr2 137631779 137632162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05115 - - ahf:112756475 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06665 8 161218465 161218860 Seca2g05115 2 137631779 137632162 PCT