Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05098 ATGGAACAAAACCATGAAAACGTTATCATTAGCATCATCCCAAACAATACTACAACGGATGATCAACCCAAACCCACTCAACATGGCTCAAGAAAGAGGAAGAGAAGTCCAATGCACGTTCTTAGGGTGGCACTCTTCATGATGCGATCACGATCCCGAAAATCAAGCGTGCTTCCTGTAGACGATGGATCCAAAAGCGTTTGGAGGAAATTGGTTAGTTCCATGAGGCCATTGCATCTTCAAAGCAACCAATCTCCACCGTCAATTTCAATTTCTAAAACGGATAATGACGTCCACGTGGCACCACCTTCACCGTCCGAATATAAAACGGACTGCGGAAGCGACTTTACGGAGGAAGAGCCTTTTTCGCCGTCTCCAGCGAGCAGCCGTTACGCTTCAGCGGTAGGACTGAATGAACTTGTGCAGAGTGATGAGGAGAATGAGATCAAGCAAGAGGTGATTATGGAAGAGGAGAGCGAGGAACGTTTTGATAATGTTGATGGGGATGAGATGATTGATGCTAAGGCTGAGGAGTTTATTGCGCAGTTCTATAAAGAAATGACGTTGCAGCGCATGAATTCGGCGGATCGTTGTTACCATGAGCGAAGTCAGAGGTCATTAGGGTTGTAA 630 0.4603 MEQNHENVIISIIPNNTTTDDQPKPTQHGSRKRKRSPMHVLRVALFMMRSRSRKSSVLPVDDGSKSVWRKLVSSMRPLHLQSNQSPPSISISKTDNDVHVAPPSPSEYKTDCGSDFTEEEPFSPSPASSRYASAVGLNELVQSDEENEIKQEVIMEEESEERFDNVDGDEMIDAKAEEFIAQFYKEMTLQRMNSADRCYHERSQRSLGL. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05098 209 PANTHER COTTON FIBER PROTEIN 1 204 - -
Seca2g05098 209 MobiDBLite consensus disorder prediction 78 99 - -
Seca2g05098 209 Pfam Cotton fibre expressed protein 169 204 IPR008480 -
Seca2g05098 209 MobiDBLite consensus disorder prediction 11 38 - -
Seca2g05098 209 MobiDBLite consensus disorder prediction 78 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05098 Seca-Chr2 137423987 137424616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05098 - - cam:101496512 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05098 2 137423987 137424616 Seca2g05098 2 137423987 137424616 PCT