Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05053 ATGCACTCCTCCAAACCCCCTCGCCGGAAAGTTGTTCCGGCGAACGGCGATGACTCTGCGGACAAACATGACCAGCTCCTTCTCTCTTCCGCCATATGTAACAACGAGGACTTAGGGCCCTTCATCCGCAAGGCTTTCATTTCCGGCAAGCCGGAGACTCTCCACCACCACCTCCGTCACTTCGCTCGCTCCAAAGAGTCCGAGATCGAAGAGGTCTGCAAGGCTCACTACCAGGACTTCATCCTCGCCGTTGACGACCTCCGATCCCTCCTCTCCGACGTCGATTCCCTAAAGTCCTCTCTCTCTGATTCCAACTCCAAGCTCCAATCCGTCGCTCGCCCCCTCCTCTCCTCCCTCGACGCCTTCGTCGAAACACGAAACGTCTCCAAGAACGTCAACCTCGCTATCGATTCCGTCCGAAACTGTATCAAGCTGATGGAAGTTTGCTCACGCGCCAACCGTCACCTCTCCGAAGACAACTTCTACATGGCGTTGAAATGCCTGGACACGATCGAGAGGGAGTATTTGGACCAAACGGCGTCGTCTACACTGAGGAGGATGCTTGAGAAGAAGATTCCAGAGATTCGGTCCCACATAGAGAGGAAGGTAAACAAGGAGTTCGGGGACTGGTTGGTGGAGATCCGAGTGGTGAGTCGCAATTTGGGGCAATTGGCTATCGGTCAAGCATCGTCGGCGAGGCAGAGAGAAGAGGATCTCAGAATTAAGCAGCGCCAAGCAGAGGAACAGAGCAGGCTCAGCGTTAGGGACTGCATTTATGCTTTGGAGGAAGAGGATGAGGATGGAATCGCCGGCGGGATCGGAGAGGATGGGTACGGTAACGGTGCCGGCGGTGGATTTGATTTAACTCCATTGTACAGGGCTTACCATATTCACCAGACGTTAGGATTAGAGGATCGGTTCAAGCAGTATTATTATGAGAACCGGAAGCTTCAGTTGACTTCAGACTTTCAGGTATCTTCGATGACGCCTTTTCTTGAATCTCATCAAACCTTCTTTGCACAAATTGCTGGTTTCTTTGTGGTTGAGGATAGGGTATTGAGGACTGGGGGTGGTTTGATATCGAAAATGGAAGTTGAGAATTTGTGGGATATTGCTGTTAGCAAAATGTGTTCTGTGTTAGAGGATCAGTTCTCTAGAATGCAAACTGCTAATCATCTCTTGCTGATTAAAGACTATGTTAGTTTGTTAGGAGTGACCCTGCGGAGATATGGGTACCCCATTGACGCATTGCTTGATGTTTTGAGCAAACATAGGGATAAGTACCATGAGTTGCTCTTGTCAGATTGTAGAAAGCAGATAGCTGAGGCTCTTTCTGCTGATAAGTTTGAGCAGATGTTGATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATTCAAACATCAGATATCATACCTGCTTTTCCTTATTTAGCACCATTTTCATCAACCGTGCCGGATTGTTGTCGCATTGTGCGGTCCTTCATTGAGGATTCTGTGAGTTTCATGTCATATGGTGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATTTAGACAGGCTTTTGGGTGAGGTTTTAGATGAAGCTTTGTTAAAGCTTATTAATACATCAGTTAGTGGTGTCTCACAAGCAATGCAAGTAGCAGCAAATATGGCTGTGTTGGAGCGTGCATGTGATTTTTTCTTTCGCCATGCTGCACAGCTTTCAGGGGTTCCCATGAGAATGGTGGAGAGGAGCAGAAGGCAGTTCCCTCTGAGAAAAGCTCGTGATGCTGCAGAAGAGGTGCTTTCTGGGCTACTCAAAGCCAAGGTTGATGGATTTATGAGCTTGATTGAGAATGTAAATTGGATGACTGATGACCCACCTCAGAGTGGAAATGAATACGTGAATGAGGTCATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTAAAGTACTTAAAAGAGTTCTATGGGAAGTTCTTTCTCACATATCGGAGAAGATAGTTGGGACTCTAGTTAGTGATTCTGTCAAAAGGTTTAATGTCAATGCTGTTACTGGAATTGATGCAGACATCCGGCTCTTAGAATCATTTGCTGATAATCAGGCCCCCCTTTTCTCTGATGGGGATGCTGATCAGCTAAAAACATCACTTGTTGAGTCAAGACAATTGATTAATTTGCTATTAAGCAATCATCCGGAGAACTTCCTGAATCCAGTGATCAGGGAGAGGAGTTACAATGCTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCGGATAGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCAAAAAAGAAATCACTGGATACATTGATAAAAAGACTTAGGGATGTTAGCTGA 2403 0.4615 MHSSKPPRRKVVPANGDDSADKHDQLLLSSAICNNEDLGPFIRKAFISGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSKLQSVARPLLSSLDAFVETRNVSKNVNLAIDSVRNCIKLMEVCSRANRHLSEDNFYMALKCLDTIEREYLDQTASSTLRRMLEKKIPEIRSHIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIAGGIGEDGYGNGAGGGFDLTPLYRAYHIHQTLGLEDRFKQYYYENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWDIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEALSADKFEQMLMKKEYEYSMNVLSFQIQTSDIIPAFPYLAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLGEVLDEALLKLINTSVSGVSQAMQVAANMAVLERACDFFFRHAAQLSGVPMRMVERSRRQFPLRKARDAAEEVLSGLLKAKVDGFMSLIENVNWMTDDPPQSGNEYVNEVIIYLEILVSTAQQILPSKVLKRVLWEVLSHISEKIVGTLVSDSVKRFNVNAVTGIDADIRLLESFADNQAPLFSDGDADQLKTSLVESRQLINLLLSNHPENFLNPVIRERSYNALDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKKKSLDTLIKRLRDVS. 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05053 800 MobiDBLite consensus disorder prediction 1 21 - -
Seca2g05053 800 FunFam Exocyst complex component 414 582 - -
Seca2g05053 800 PIRSF Sec15 4 800 IPR007225 GO:0006886|GO:0090522
Seca2g05053 800 PANTHER SEC15 13 798 IPR007225 GO:0006886|GO:0090522
Seca2g05053 800 FunFam Exocyst complex component 592 739 - -
Seca2g05053 800 Pfam Exocyst complex subunit Sec15-like 460 764 IPR046361 -
Seca2g05053 800 Gene3D - 414 587 IPR042045 -
Seca2g05053 800 Coils Coil 229 249 - -
Seca2g05053 800 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 592 739 IPR042044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05053 Seca-Chr2 137090176 137092578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05053 K19985 - gmx:100796432 1382.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05053 2 137090176 137092578 Seca2g05053 2 137090176 137092578 ECH