Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05033 ATGTTAGAGAAGTGTTTGGGAGCTCAAAGGGCAAGAAGATTCCAGAGAACTCTCAGACATTGCAAGGTTACCATCCTCTGCCTCGTCCTCACCGTTGTTGTCCTACGTGGCACCATCGGTGCCGGAAAGTTTGGCACGCCGGAGCAGGATTTCGTCGACATTCGCAACCGCTTCTACTCACGCAAGCTACCTGAGTCTCATCGCCTTCTTGGGGAATTTCATTCTACGACGTCGTCTTCCTCTTCCTCTGGTTCTGTAAGTTCCACTTCCACCACCAATTACAATGCCTTTGACATCAACACCATATTGGTCGATGAAGCAGAAGAAGAAAAGCACCGTGAGAAACGCAACCCAAACGAGCCTTATCGTCTTGGACCTAAAATCTCGAATTGGGATGAACAGAGATCGACGTGGCTTCGTGAAAACCCCAATTACTCGAATTTCATTCGACCCAACAAGCCTCGGGTGCTTCTGGTAACTGGGTCGTCGCCGAAACCTTGTGAGAACCCCGTTGGTGATCATTACTTGTTGAAGTCTATTAAGAACAAGATTGATTATTGTCGCTTGCATGGTATTGAGGTGTTTTACAATATGGCTCTTCTTGATGCTGAAATGGCTGGTTTTTGGGCTAAGCTTCCTTTGATAAGGAAGCTTCTTTTGTCCCACCCTGAGGTGGAATTCTTGTGGTGGATGGATAGTGATGCCATGTTCACAGACATGGCATTTGAAGTGCCGTGGGAGAGGTATAAAGATTACAATTTGGTGATGCATGGGTGGAATGAGATGGTGTATGACCAAAAGAATTGGATTGGGTTGAACACTGGGAGCTTTTTGTTGAGGAATTGTCAGTGGTCATTGGATATTCTTGATGCCTGGGCGCCAATGGGGCCAAAAGGGAAAGTTAGGGATGAGGCTGGGAAAGTACTCACACGTGAACTCAAGGATAGGCCAGTTTTTGAAGCAGATGATCAATCAGCAATGGTTTATTTGTTGGCAAAACAGAAGGACATGTGGGGTGATAAGGTTTATCTTGAGAATGCTTATTACTTGCATGGTTATTGGGGTATTTTGGTTGATAGATATGAGGAGATGGTTGAGAATTACCATCCTGGTCTTGGTGACCATCGGTGGCCATTGGTGACTCATTTTGTTGGTTGCAAGCCTTGTGGGAAGTTTGGAGATTACCCTGTTGAGAGATGCTTGAAGCAGATGGATAGAGCTTTCAATTTTGGAGATAACCAGATACTGCAGATTTATGGCTTCAGGCACAAGTCATTGGCTAGTAGGAGAGTTGAGAGAATAAGGAGCGAGACTAGCAATCCTCTTGAGGTCAAAGATGAACTCGGCTTGCTTCATCCAGCATTTAAGGCAGTGGAGGTATCATCATCTAGCTGA 1395 0.4559 MLEKCLGAQRARRFQRTLRHCKVTILCLVLTVVVLRGTIGAGKFGTPEQDFVDIRNRFYSRKLPESHRLLGEFHSTTSSSSSSGSVSSTSTTNYNAFDINTILVDEAEEEKHREKRNPNEPYRLGPKISNWDEQRSTWLRENPNYSNFIRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKQKDMWGDKVYLENAYYLHGYWGILVDRYEEMVENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFRHKSLASRRVERIRSETSNPLEVKDELGLLHPAFKAVEVSSSS. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05033 464 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 448 IPR008630 GO:0016020|GO:0016757
Seca2g05033 464 FunFam xyloglucan 6-xylosyltransferase 2 152 303 - -
Seca2g05033 464 Pfam galactosyl transferase GMA12/MNN10 family 153 392 IPR008630 GO:0016020|GO:0016757
Seca2g05033 464 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 152 305 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05033 Seca-Chr2 136926367 136927761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05033 1 464 Glycosyltransferase AT4G02500 81.466 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05033 K08238 - gmx:100794266 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05033 2 136926367 136927761 Seca2g05033 2 136926367 136927761 ECH