Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05032 ATGGCTTCCGGAGACCTCAAACAACGAGTCACACACGATCCAAACAGTAACACCACTCCCATGCCCATGAACGAAGACAAGAAGAAGATCGAAGGCGGAGGAGGGATCAAACGGGACAAGCGAATGGTCATGGCCAAACGCGGTCTTAAATCACTCGCTATAGCTGTTTTGCTCCCTCTTTCGCTTACTGTGTTATCCGTTTACATAGGCTCATCCATGCATAACCAACAGTCACGTGCATGCTATGGAGGGTTCCATAGAAACCCCACTGCTCTCTTGCTTTACTTGCTTCAGCTCTTCTTCACTGTGCTATGGGACCCTATTGTGTTCGGGGCAGAGGCACCAAGGCTCGGATTCATTGTGTTATTTGGGTTGTTTGCGAGCCTGCTTGGGTGCATGCCTGTCTTTGAGAGGGTCAATCCCATAGCACGTGATTTGATAAAGCCTTGTTTGGCATGGATTGCTTTTCTATCTATTGTAAATCTTAAGCTACTTTTTGTCTGA 504 0.4742 MASGDLKQRVTHDPNSNTTPMPMNEDKKKIEGGGGIKRDKRMVMAKRGLKSLAIAVLLPLSLTVLSVYIGSSMHNQQSRACYGGFHRNPTALLLYLLQLFFTVLWDPIVFGAEAPRLGFIVLFGLFASLLGCMPVFERVNPIARDLIKPCLAWIAFLSIVNLKLLFV. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05032 167 MobiDBLite consensus disorder prediction 1 34 - -
Seca2g05032 167 CDD TSPO_MBR 100 165 IPR004307 GO:0016020
Seca2g05032 167 MobiDBLite consensus disorder prediction 9 23 - -
Seca2g05032 167 Pfam TspO/MBR family 59 165 IPR004307 GO:0016020
Seca2g05032 167 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 83 165 IPR004307 GO:0016020
Seca2g05032 167 Gene3D TspO/MBR protein 50 166 IPR038330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05032 Seca-Chr2 136923150 136923759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05032 K05770 - gmx:100785785 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05032 2 136923150 136923759 Seca2g05032 2 136923150 136923759 ECH