Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05027 ATGGCCACCGTAATCGACGGCAAAGCCGTTGCACAAACTATCCGATCTGAAATCGCCGAGGAGGTGCGTCTCCTCTCTCAAAAATACGGCAAGGTTCCGGGACTGGCAGTGGTGATAGTAGGGAACAGAAAGGACTCGCAAAGCTATGTAGGAATGAAGAGAAAAGCATGTGCTGAATTGGGAATCAAGTCCTTCGATATCGACCTTCCAGAGCAAGTATCCGAAGCTGAATTGATAAAGCAGGTTCACGAGTTGAATGCTAACTCTGATGTACATGGTATATTGGTTCAACTTCCATTGCCTAAGCACATAAATGAAGAGAAAGTTCTGACTGAAATCAGCCTTGAGAAGGATGTAGATGGATTCCATCCTTTGAACATTGGCAAGCTTGCGATGAAAGGCAGAGATCCCCTATTCCTTCCCTGCACTCCCAAGGCATGTCTTGAACTATTATCACGAAGTGGTGTAACTATAAAGGGAAAGAAGGCAGTTGTGGTTGGTAGAAGCAACATAGTTGGATTACCAGCTTCATTGCTGCTTTTGAAAGCAGATGCTACAGTTACCATTGTCCATTCTCGCACAAGTCAACCAGAAAGTATCATACGTGAAGCAGATATTGTTATTGCAGCAGCAGGACAGCCCATGATGAAATTTTTGTGGTACAGGTCCTTGTACCCCATCAAGTAG 687 0.4469 MATVIDGKAVAQTIRSEIAEEVRLLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELGIKSFDIDLPEQVSEAELIKQVHELNANSDVHGILVQLPLPKHINEEKVLTEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKACLELLSRSGVTIKGKKAVVVGRSNIVGLPASLLLLKADATVTIVHSRTSQPESIIREADIVIAAAGQPMMKFLWYRSLYPIK. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05027 228 FunFam Bifunctional protein FolD 7 143 - -
Seca2g05027 228 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 2 220 - -
Seca2g05027 228 Gene3D - 5 215 - -
Seca2g05027 228 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 IPR020630 GO:0004488
Seca2g05027 228 Gene3D Leucine Dehydrogenase, chain A, domain 1 7 140 - -
Seca2g05027 228 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 216 IPR020631 GO:0004488
Seca2g05027 228 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 IPR000672 GO:0004488
Seca2g05027 228 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 IPR000672 GO:0004488
Seca2g05027 228 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 IPR000672 GO:0004488
Seca2g05027 228 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 IPR000672 GO:0004488
Seca2g05027 228 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 1 121 IPR046346 -
Seca2g05027 228 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 IPR020867 GO:0003824
Seca2g05027 228 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 214 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05027 Seca-Chr2 136903911 136907054 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05027 - - gmx:100783652 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05027 2 136903911 136907054 Seca2g05027 2 136903911 136907054 ECH