Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05025 ATGGCAGCCAAGCCAGCAGCTGAAGAACCTCCTCATGGAGAAACCCTCAAGTATCAGACTTGGGTTTTGAGAGTCTTGATCCACTGCGATGGCTGCGAAAAGAGAGTTAAGAAAATTCTTCAGGGAATTGATGGGGTTTACAAAACAGAGGTTGATTCTCGGCTGCACAAGGTTACGGTCATTGGTAACGTGGATGCTGAGACTCTCATAAAGAGGCTTTCAAGATCAGGGAAATCAGTGGAGCTATGGCCAGAAAAGCCTCCTGAGAAGAAAGATAGTAAAAAGTCTGCAAAATCCAAGGCTGGTGATGGTGGTGATAATAATAATAATAAGAAGAAGAAGGAGAAAGAAGACCAAAAGAATAATAGTGAACCAGTTGGTGAGGGTGGTGGTTCTAAAGAGGGTTGTAACATAGATGCAGCTGATGAAGATTCAGACAAAGAAGAAGGTGGTCAAAGTGATGAATGTGAAGGTGGTGGTGGTGGTGGTGGTGGTGAAGGTAGTGGTAAGAAAAAGAAAAAGAAGAAAAAGAAGAAGAACAAAGGAGAAGATGGTGGTTCTGATCCTCCTCCTAATAATAATAAAGGAGTAGGAGGAAAAGAAATTGGTACAGTTGATGCAGCAGTCCCTGAAAACAAGGCCAATTCTAAAGATCTTATTGGGCCTCCAATTCAGGTTCAGCATGCATACCCATATCCACCACCTATGTACTATTCACCCCCTCCTCCTCCAGCATATGGTGTAAGCTATAACACAGCATATCCTATCTCTAGTGCTTCATATTATGTTGGAGCCCCTGTCATGCCCATGCATGCTTACACTACATACCCTAGACTGCCTCCACCTCCTCCACCGTCTGATCCAATCAAGTACCATGGTGATGATGAAGATGAATATGAAGGTGGGTTTTGCTCCATTATGTGA 924 0.4351 MAAKPAAEEPPHGETLKYQTWVLRVLIHCDGCEKRVKKILQGIDGVYKTEVDSRLHKVTVIGNVDAETLIKRLSRSGKSVELWPEKPPEKKDSKKSAKSKAGDGGDNNNNKKKKEKEDQKNNSEPVGEGGGSKEGCNIDAADEDSDKEEGGQSDECEGGGGGGGGEGSGKKKKKKKKKKNKGEDGGSDPPPNNNKGVGGKEIGTVDAAVPENKANSKDLIGPPIQVQHAYPYPPPMYYSPPPPPAYGVSYNTAYPISSASYYVGAPVMPMHAYTTYPRLPPPPPPSDPIKYHGDDEDEYEGGFCSIM. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05025 307 Gene3D - 17 89 - -
Seca2g05025 307 Pfam Heavy-metal-associated domain 24 78 IPR006121 GO:0046872
Seca2g05025 307 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 16 307 - -
Seca2g05025 307 MobiDBLite consensus disorder prediction 80 226 - -
Seca2g05025 307 SUPERFAMILY HMA, heavy metal-associated domain 18 84 IPR036163 GO:0046872
Seca2g05025 307 ProSiteProfiles Heavy-metal-associated domain profile. 18 81 IPR006121 GO:0046872
Seca2g05025 307 MobiDBLite consensus disorder prediction 80 123 - -
Seca2g05025 307 CDD HMA 27 81 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05025 Seca-Chr2 136880794 136882550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05025 - - gmx:100791626 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05025 2 136880794 136882550 Seca2g05025 2 136880794 136882550 ECH