LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g05024	ATGCGCTTCACTGTCACCGAAAACTACCTGAAACTTGAAAATTTGTTGCACAGTAGCCGCTGGGTGAGAGAAAGAAAGCTCGGCGTTCAGAGTTGGCAAAACGGAAGGTCAAAGAAGGTTCAGAGATTGATCAAAGCAATGAGGATCGTTGGGCTAACCGGTGGAATAGCTTCTGGTAAGAGCACCGTTTCCAATCTATTCAAGTCTCAAGACATCCCCGTTGTCGATGCTGACGTCGTCGCTCGCGTACGTTCCTTCTTCTTCTCTGTGTTTTTTAGGTTTTGCTTTCGCTTAGGGAAAAACTCTCTCAATTTCAGTGATTATTGGAATTTACAGAATGCTTTGAAGAAAGGGAGCGGTGGATGGAAGAAAGTTGTTGCAGCTTTTGGTGAGGAAATTCTACTTGACAATGGAGAAGTTAACAGACCTAGGCTTGGCCAAATTGTTTTCTCCGATCCCGATAAGCGTCAATTTCTCAATCGATTGCTGGCTCCTTATATATCCTCTGGGATCTTTTGGGAAGTGTTGAAGCTGTGGTTGAAAGGTTACAAGGTTATTGTTCTTGATGTCCCTTTGTTATTTGAGGCCAAGATGGACAAGTTCACAAAGCCTATTATTGTTGTGTGGGTTGATCCTGAAACACAGATTCAGAGGCTCTTGTCAAGAGACAAGTCCAGTGAGGAGGATGGTAGGAACAGGATTAATGCTCAGATGCCACTGGATGTTAAAAGGAGTAAAGCAGATATAGTAATAGACAACAATGGTTCACTGGATGACTTAAATCAGCAATTTCAGAAGGTTTTGGTTCAGGTCACAAGGCCTTTGACATGGCGTGAGTTTTGGCTTTCCAGGAATGGAGCCTTGACCATTCTTGCTTCACTCACCTCAGGTGTTGTTTTATGTATAAAGGCATTTAGTTCATAG	924	0.4307	MRFTVTENYLKLENLLHSSRWVRERKLGVQSWQNGRSKKVQRLIKAMRIVGLTGGIASGKSTVSNLFKSQDIPVVDADVVARVRSFFFSVFFRFCFRLGKNSLNFSDYWNLQNALKKGSGGWKKVVAAFGEEILLDNGEVNRPRLGQIVFSDPDKRQFLNRLLAPYISSGIFWEVLKLWLKGYKVIVLDVPLLFEAKMDKFTKPIIVVWVDPETQIQRLLSRDKSSEEDGRNRINAQMPLDVKRSKADIVIDNNGSLDDLNQQFQKVLVQVTRPLTWREFWLSRNGALTILASLTSGVVLCIKAFSS.	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g05024	307	PANTHER	DEPHOSPHO-COA KINASE-RELATED	48	264	-	-
	Seca2g05024	307	Gene3D	-	6	276	IPR027417	-
	Seca2g05024	307	CDD	DPCK	49	259	-	-
	Seca2g05024	307	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	47	267	IPR027417	-
	Seca2g05024	307	ProSiteProfiles	Dephospho-CoA kinase (DPCK) domain profile.	49	282	IPR001977	GO:0004140\|GO:0005524\|GO:0015937
	Seca2g05024	307	Pfam	Dephospho-CoA kinase	114	259	IPR001977	GO:0004140\|GO:0005524\|GO:0015937
	Seca2g05024	307	Pfam	Dephospho-CoA kinase	49	82	IPR001977	GO:0004140\|GO:0005524\|GO:0015937
	Seca2g05024	307	NCBIfam	dephospho-CoA kinase	113	266	IPR001977	GO:0004140\|GO:0005524\|GO:0015937
	Seca2g05024	307	Hamap	Dephospho-CoA kinase [coaE].	47	274	IPR001977	GO:0004140\|GO:0005524\|GO:0015937

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g05024	Seca-Chr2	136876589	136877618	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g05024	K00859		-	gmx:100791096	373.244

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca2g05024	2	136876589	136877618	Seca2g05024	2	136876589	136877618	ECH