Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05010 ATGGATCGAAGAGGAAATGGGATTTGGATGAAGGCTTCTCAATGTGGAGGAGGTAGGGATGCAATAAAGGGGTTAGGGTTAGGGTTAGGGTTAGGGCTTGGTTCTGGGAGGAGAGAGATGGTGGAGTCTGAGCTTGAAGAAGGTGAAGCCTGCTCATACCAGAACCACGAAGATTACGACGCCACCGTTGATCCCGATGTTGCCCTCTCTTACATTGTAAGGGTCTTTACCTTGATTTTGCCTGCTTTGGATGAAAAACTTCAAGATGTTCTGGGACACTTTCAAAAAGATTTTGAAGGTGGGGTGTCTGCAGAGAATCTGGGATCAAAATTTGGTGGTTATGGTTCATTTTTGCCTACCTATCAGCGCTCTCCTGTTTGGCCTCATCCAAAGACTCCACAAAAAATTCATAGTCAAAATACACCCAAATCTCCTAATAATTTGCATCCCGAGGGTGGACAAGGGGATGCTGTACAATGTTCAACTGGAGCTCAGTCATTGAGACTTGGCCCAGGTTCTGCTACCTCCTCACGGCTGACTGCAATTAAGGGACTCCCTTTAGATGATGGAACCAATCAAGAAAAAGGCACAACAATCACTAGTGCTGAGGCATTAACTTCTAAGTATGACACGAAAACTACTAGCATATCAGACCAGAAGACACTGAAGGTTCGAATCAAAATGGGTCCTGACAATTTGTCAACACGGAAAAACGCTGCCATATACAGTGGACTTGGTCTGGATGTCTCTCCATCATCGTCACTGGATGACAGCCCCTCAGAAAGTGAAGGAATTTCTCGTGGTCCTCCAGATGCTCCCTTTGAATCTCCTACCAGTATCCTTAAGATTACGACAACCCTCCCTGAGCTGTTGTCTCCTCTCCTCAATGATCTCATTGAATTAACTGAAAAGGAAATACGTGCCAGAGACAGCATCCCTGGCCTTGTTCATATGGATGACCCAGAAAGTGCTGGCATGTTGCTAAATGAATCTAGTATTGTAAAAGGTGACAGAAAATTGCCAGGAGGGAAGAAAGTGAAGTCTCTGGAGGGTTATGAGTCCTCAATGGAAATCAAGGGTGGCAATAAGAAGAATAGTCGTAATGATGTTGTAGTGCTGTCAAGGAAGGAACAAGGTACTGATGCCTTGACTATGGAGGAGCTAGTTTCAAAAACCATGAAGCTTCCAATTTTATCCAGTTCATATTCTTTCAGTGATGACTCAGTAAAGGCTGTTGATGGGCCATGTGAGTCATTGAAGGATGCCAACAAGGGTATGGTGAGGGAGAAAACCTCTGATCAGGCACAAAAGGAACAGACGCAGCCAACATCTATTGAAGTGAATGGTTTTTCTGAGAGGGCCAAGGGAAGTTCAGGAAGAAAAGTTGTGGGAGATAAGGTTTCGCATGATGACTCATCATTTAGTACAGTCAAAGACAATCCTCAAGGAGATAAAATTTGTAACTCAATAATCGCTGAATCTAATGTTTCCAAAGTTAGGGCAGCATCAAACAGTGAATGCATAGAGCCTCCTAAGAAGGCTAATCAGAGAGGCGGCCTGTGTGAACAAGACAGTATGACATTACCTGTCACAACAGAACATCCATTTCCTGGGGGGAAGAAGAAGACAAAGGGAAGTCATGGCACTGTGGTTATAGAGAGGGAAAAAGAAAGCATGAAGGTTGGATCCTCTTCGGTTCCTAAAACAAAAAGGAGTTCTGATGATAGTTCTGCATCAAAAAATGAAACTGAAGATGTCAAAGTACAAAAGAGTCTTGGAAAGGCTATAGATACTTATAAAGATTTCTTTGGGGAATTGGATGAAGATGAGGACAGAATTGATTCACTGGAAACCCCTTATGAAGATAAACTTAAGGAATCTGAGGTGGTCGAGAGAACACCTACAACTAATTGTAAACCAAAGGAGAGATCGGGTGGTAAGAAAGCTGATAAGCCATTAACAGCAGATTTATACCCTAAAACAGCCACAAATGTCTGGTGCCCTGGAAATGCACATGGTACTGGTGCAGAGAATGGAAAAGGGGTTCCTGTAATGTTGCCTCCTGTTCAGATGGAAGATAATTGGGTACAGTGTGACAGGTGTCATAAATGGCGTCTTCTTCCTGCTGGCACAAATCCTGATAACCTGCCTGAAAAGTGGCTGTGCAGTATGCTTAATTGGCTGCCTGACATGAATCGATGTGTTTTTAGTGAGGATGAAACCACGAAAGCCCTTATTGCATTATATCAAGGGCCACCTCTTGATGGTCAAAGCAACCTGCAAAATGTCTCTGGAAGTGTAATGGTGGGAGGAACCATGGCAACTTTCCAGCATCCTGATCAACACCAGCTAAACAATGATCTAAATGCAGTGCCTGGGGGAAAGAAAAGAATTGTGAAAGAAATATCAAATTCTACAAATAAAGATGGCTTTTCTCAATCGTCATATTCTCTAAAGAAAAACTCGCAATCAACAGTGAAAAGCATTAGCTTAAATGACGTGAACAAATCTCCTGTTGTGAGTGATGCTGATGTTCCACGAGAGAAACACAAAAATAAGCAGGGAATGCTGGAGCATAATTCTGATAGAGGTGATATGAAGAATATGAAGGTGAAAAGCAGGAGGGACCCTGATCAAGATTGTTCAAGGCCATCCAAGAAAGGCAAGACTGACAAGATTCACTCAACTGATGAAGAGTGGATTCCAGAACAGAATGGGAGCACTAGAAAGGTGGGTCATAGCTCAAGCAGCGCTTTTCCAACTTCTTCAGCTGGCAAAGATCGGCCTAGACAGAAAGACCACTCCTCTTCGAGGGACTCCAAATCAGGAAAAGACAAGCTGCCAGTTTCTGCTGAAAAGACAAAAGATAAGGGTCAGGGTTCTTTGGATGAGGAATCCCTGGATTTGGGGAATTATGATTCCATTGGTAATGTGAAAAAGAGGAAATTGAAGGAGTATCAGGATGCTCAAACTTGTAGTGCTGGTAATCCTCACCTACTGGAGAGCAGAATTTCTGAGCAGGAGTTCAGTAATTCCAGGAAGGAAAAGAAAGCTAGAAATTCAAGATCTGAAGGTAAAGAATCAAGTGCCAGTAAAGGAAGTGGTAGGTCTGACAAAAAAGCTAGTCATACAAAGAACCAGAAATTCAGGCAAAATCCTGGGAACAGTCTGTCACAACGGAGCTTGGATGGCATGGACTGTTTAAAAAGGGACTTGGGGTCTGCACAGGCTTCTGTAGCTGCCACTTCAAGCTCTTCTAAGGTTTCTGGCTCACATAAAACCAAAGCCAGCTTCCAAGAAGTGAAAGGCTCACCTGTGGAATCAGTTTCTTCATCGCCTATAAGACTTTTAAATACAGATAAGTTTGCAAACAGGGAAATTATGGGGAAAGATGACTCTCATGATATTGCTGCTATGGATAGTCCAAGAAGATGTTCAGATGGTGAAGATGATGGTGCAAGTGATCGATCTGGAACGGCTAGGAAGGACAAATCCTTCACCATGGCACACAGATCTGATTTTCAGAACAAGGGTGTTAATCATATGTCAGATACTAAGCCTAAAGCTCAAACAGCCAGCCATTGTACCAATGGTGGTGTGGACATTGTAGCTCAAGATGGGATACATCTCAGTGCAAAGCAGATTCAGCATCATGGTGAAGACAGAACTGATGTTTATCATGCTAATATGTCTCGTGCAAGGAAGAGTGTCATGGAATCAGGTTTGGAGGACAACAATGACAGCTGTAAGTTAGAGTCCCATGCAGAAAAAGTCAAGAATACTGGTTCTCCTAGTCAGTTGCAAGATCAGTCTCCTCTACGCAAGGCAAAACATAGGGATGGCAAAGTTAGGTTGCCAGAGAAGTTTGGGTTCAAGCCTGACCAAAGTGAGAATATGCATGCTGGCAAGAAAGATTCTCATACAGGAAAAAATGAGAGTAGGAAAAAAGATAATCACTTAAATAAAGGGCGTGACCTTCAAGAGGTTAGTGTAGATGCCCTATGCAAACAGGAGGCATTACATGCTCCTAATCAGAATCAGTTGCCAGACTGTGATACAGAAAGGTCTTCAAAGAGGTCTGTTTTGGAAAGAACTGATCAAGAAGTACTTGGGAAAGGGAAGTCTTTGCCCTCTGGAGGATCTCAAGTTGAGACATTGAGTCGTTGCCCACGACCGGTTGTTGGTTCCCATAAAGGAAATGGAGATGTGGAAGTTGATCCTTCCAAAGTTGATGATGTATCAAAGCTGCAAAAAAAGCAATTGAAAAGGGCTGATCATCAAAATGGAACTCAGCAAATTGGTTCAAGAAATCCAGCACTTAATGGACACAGGTCCAAGGAGCTCGATGCCCCTAGTCCAGTTAGAAGGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGTCTTAAGAATTCTGGATCCACTCTTGAGAGCACTAGTCTTTACTTCCAGGCAGCCCTCAAGTTTCTTCATGGAGCCTCTCTGTTAGAATCTGGCAACAATGATAATGCTAAACATAGTGAGATGATTCAATCAAAGCAAATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCATGGAGGTGGCATATATGAGGGTAATATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCAGACAGCCCTGCAAATGATTCCTCTTGGTGAGTCTCCATCATCATCTGCCTCTGACGTTGACAATGTTAACAACTCTACAGCAGCTGACAAGGTTGCATTATCCAAGAGTGTCAATTCGCCCCAAGTTGCTGGAAACCATGTTATTGCTGCACGAAATCGTCCCAATTTTGTGCGGTTGCTCAGTTTTGCTCAGGATGTGAATTTTGCCATGGAAGCCTCAAGGAAATCACGAAATGCTTTTGCAGCGGCTAATTCGAGCCTGGGTGTGGGCAAGTATGCTGATGGTATCTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCATGATGTGGAGGGGTTACTGCGTTTGGTACGGCTTGCTGTAGAGGCCATCAATCGTTGA 5121 0.4335 MDRRGNGIWMKASQCGGGRDAIKGLGLGLGLGLGSGRREMVESELEEGEACSYQNHEDYDATVDPDVALSYIVRVFTLILPALDEKLQDVLGHFQKDFEGGVSAENLGSKFGGYGSFLPTYQRSPVWPHPKTPQKIHSQNTPKSPNNLHPEGGQGDAVQCSTGAQSLRLGPGSATSSRLTAIKGLPLDDGTNQEKGTTITSAEALTSKYDTKTTSISDQKTLKVRIKMGPDNLSTRKNAAIYSGLGLDVSPSSSLDDSPSESEGISRGPPDAPFESPTSILKITTTLPELLSPLLNDLIELTEKEIRARDSIPGLVHMDDPESAGMLLNESSIVKGDRKLPGGKKVKSLEGYESSMEIKGGNKKNSRNDVVVLSRKEQGTDALTMEELVSKTMKLPILSSSYSFSDDSVKAVDGPCESLKDANKGMVREKTSDQAQKEQTQPTSIEVNGFSERAKGSSGRKVVGDKVSHDDSSFSTVKDNPQGDKICNSIIAESNVSKVRAASNSECIEPPKKANQRGGLCEQDSMTLPVTTEHPFPGGKKKTKGSHGTVVIEREKESMKVGSSSVPKTKRSSDDSSASKNETEDVKVQKSLGKAIDTYKDFFGELDEDEDRIDSLETPYEDKLKESEVVERTPTTNCKPKERSGGKKADKPLTADLYPKTATNVWCPGNAHGTGAENGKGVPVMLPPVQMEDNWVQCDRCHKWRLLPAGTNPDNLPEKWLCSMLNWLPDMNRCVFSEDETTKALIALYQGPPLDGQSNLQNVSGSVMVGGTMATFQHPDQHQLNNDLNAVPGGKKRIVKEISNSTNKDGFSQSSYSLKKNSQSTVKSISLNDVNKSPVVSDADVPREKHKNKQGMLEHNSDRGDMKNMKVKSRRDPDQDCSRPSKKGKTDKIHSTDEEWIPEQNGSTRKVGHSSSSAFPTSSAGKDRPRQKDHSSSRDSKSGKDKLPVSAEKTKDKGQGSLDEESLDLGNYDSIGNVKKRKLKEYQDAQTCSAGNPHLLESRISEQEFSNSRKEKKARNSRSEGKESSASKGSGRSDKKASHTKNQKFRQNPGNSLSQRSLDGMDCLKRDLGSAQASVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRLLNTDKFANREIMGKDDSHDIAAMDSPRRCSDGEDDGASDRSGTARKDKSFTMAHRSDFQNKGVNHMSDTKPKAQTASHCTNGGVDIVAQDGIHLSAKQIQHHGEDRTDVYHANMSRARKSVMESGLEDNNDSCKLESHAEKVKNTGSPSQLQDQSPLRKAKHRDGKVRLPEKFGFKPDQSENMHAGKKDSHTGKNESRKKDNHLNKGRDLQEVSVDALCKQEALHAPNQNQLPDCDTERSSKRSVLERTDQEVLGKGKSLPSGGSQVETLSRCPRPVVGSHKGNGDVEVDPSKVDDVSKLQKKQLKRADHQNGTQQIGSRNPALNGHRSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKNSGSTLESTSLYFQAALKFLHGASLLESGNNDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVIYSSHTSASRDRHELQTALQMIPLGESPSSSASDVDNVNNSTAADKVALSKSVNSPQVAGNHVIAARNRPNFVRLLSFAQDVNFAMEASRKSRNAFAAANSSLGVGKYADGISSIKKALDFSFHDVEGLLRLVRLAVEAINR. 1707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05010 1706 MobiDBLite consensus disorder prediction 907 924 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 529 590 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 546 561 - -
Seca2g05010 1706 PANTHER CW-TYPE ZINC FINGER 38 1706 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 458 473 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1340 1458 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1127 1165 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 127 159 - -
Seca2g05010 1706 Coils Coil 1463 1483 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1047 1062 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 989 1006 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 452 480 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1007 1045 - -
Seca2g05010 1706 Pfam CW-type Zinc Finger 694 740 IPR011124 GO:0008270
Seca2g05010 1706 MobiDBLite consensus disorder prediction 248 277 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1352 1370 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 133 148 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 842 899 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1255 1325 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1272 1325 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 804 837 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1080 1104 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 573 590 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 627 653 - -
Seca2g05010 1706 ProSiteProfiles Zinc finger CW-type profile. 689 742 IPR011124 GO:0008270
Seca2g05010 1706 MobiDBLite consensus disorder prediction 1402 1425 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 926 963 - -
Seca2g05010 1706 Gene3D - 687 744 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 803 974 - -
Seca2g05010 1706 MobiDBLite consensus disorder prediction 987 1065 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05010 Seca-Chr2 136744747 136754184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05010 - - gmx:100806105 2510.72