Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05006 ATGGAAGTCGAGTCTTTTGAGGATGAGGCGGTTGCCAAATTGTTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGGGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTTCCCCCTGATGATAAGTATGGACGACCTGGATTTAAGACTATACTTAGAAAGGTAAAGGAGGCTTGGGAAAGTAAGAGGGATATGTTAGTTAAGAGTGGAACATTTGCAATTGAACAGCTTTCTGAGGCATTGTCTGGTCGTTCAGATTCTGATAAATTGGCTGATGGTGTTTCAGACAATGCATTGCGTCTATGCTCAGAGCAGCTCTCTGGGAGCTATGATTCAGAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATCAACTTGATGCTTTACCACTCCAAAAAGTTGGAGGATACCGGGAAGTTGGATGCAGCTAATGAAAGACAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGGGGCATTCATGATCATATTGGGGGAGGTTTTCACAGATATAGTGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCTAATGTTTATTTAGATGCTTTTTGTATCACAAAAGATACCTTCTATTCATGTATAGCACGGGATATCCTTGATTATTTAAGGAGAGACATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTAAAACAAAAAAGGAAGGAGCCTTTTACATATGGACCAACAAGGAGGTCGAAGACATCCTTGGAGAGCATGCTGCTCTTTTTCAGGAGCACTATTACGTAAAGGAGTCAGGCAACTGTGACCTATCTCGAATGAGTGATCCTCATAATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGATCCTTCAGAAATAGCATCAAAATATGGCATGTCAATTGAGACATATCAAGAAATTCTTGGAGAATGTAGGCGTAAGTTGTTTGAAGTAAGGTCAAGGCGGCCAAGGCCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGCAATCTCATCTTTTGCTAGAGGTTCTCAGATTCTTAAGGGTGAAGCTGAAGGGACCAAGTTCAACTTTCCTGTTGTTGGCACTGAACAAAAGGAGTACATGAGAATTGCAGAAAAGGCAGCATTCTTTATTAGGAAGCAACTTTATGATGAGGAGACTCACAGGCTACACCATAGTTTCAGAAATTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTACGAATTTGGTGGTGGAATCAACTGGCTTCAATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAAGGATGGAGGTGGATATTTCAATAATACAGGAGAAGATCCTTCAGTTCTTCTACGTGTGAAAGAAGACCATGATGGGGCAGAACCCTCTGGGAACTCAGTGTCTGCTATAAATCTTACAAGATTGGCTTCCATGGTTTCTGGAAGTAAGGCTGAGCAGTATAAGCAAAATGCAGAACATCTATTGGCGGTTTTTGAGAAAAGATTGCAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGCTGCGTGTACCCTCCCGGAAGCAAGTGGTGGTGGTTGGTGAAAGGACTTCTGAGGAATTTGAAAGCATGCTTGTTGCAGCTCATGCATTATATGATCCCAATAGAACAATTATTCATATAGATCCCAACAACAAAGAAGAGATGGAATTTTGGGAAGAAAATAACAGCAATATTGCTCTCATGGCGAAGAATAACTATGCAATCAACAAGGTTGTAGCACTTGTGTGCCAGAACTTCACCTGTAGTCCCCCTGTGACTGATCATTCGGCACTTAAAGCTTTGCTCTCCCAAAAACCCTCCTCCTCTTCGTCTACATAA 2082 0.4236 MEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWESKRDMLVKSGTFAIEQLSEALSGRSDSDKLADGVSDNALRLCSEQLSGSYDSEFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLDAANERQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFCITKDTFYSCIARDILDYLRRDMIGPEGEIFSAEDADSAETEGAKTKKEGAFYIWTNKEVEDILGEHAALFQEHYYVKESGNCDLSRMSDPHNEFKGKNVLIERKDPSEIASKYGMSIETYQEILGECRRKLFEVRSRRPRPHLDDKVIVSWNGLAISSFARGSQILKGEAEGTKFNFPVVGTEQKEYMRIAEKAAFFIRKQLYDEETHRLHHSFRNSPSKAPGFLDDYAFLISGLLDLYEFGGGINWLQWAIELQETQDALFLDKDGGGYFNNTGEDPSVLLRVKEDHDGAEPSGNSVSAINLTRLASMVSGSKAEQYKQNAEHLLAVFEKRLQDMAMAVPLMCCAADMLRVPSRKQVVVVGERTSEEFESMLVAAHALYDPNRTIIHIDPNNKEEMEFWEENNSNIALMAKNNYAINKVVALVCQNFTCSPPVTDHSALKALLSQKPSSSSST. 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05006 693 Gene3D - 418 599 IPR012341 GO:0005975
Seca2g05006 693 SUPERFAMILY Six-hairpin glycosidases 136 530 IPR008928 GO:0005975
Seca2g05006 693 SUPERFAMILY Thioredoxin-like 1 91 IPR036249 -
Seca2g05006 693 FunFam spermatogenesis-associated protein 20 418 595 - -
Seca2g05006 693 Pfam Protein of unknown function, DUF255 1 107 IPR004879 -
Seca2g05006 693 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 1 686 IPR024705 -
Seca2g05006 693 PIRSF UCP006402_thioredoxin 1 690 IPR024705 -
Seca2g05006 693 Gene3D Glutaredoxin 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05006 Seca-Chr2 136713991 136719746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05006 - - gmx:100777751 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05006 2 136713991 136719746 Seca2g05006 2 136713991 136719746 ECH