Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04999 ATGGGCCATAATGGCCCAAGTTCAAGTCCAGGAAGGTATGGGCCGAAATCGAACCAGCCCAAGCGAGTTTCGCCTCTTAGGTGTATACCTTTGCTTTCTCATTTCTGCGTTTTTGTGGCTGTGGGACACAAACATCGTCGTCTCCGCTCTAGGGTTGCTCCAATGGAGGATACCCAAGAAATTGAGGAGAAGGCCCATGAAGAAGTGATTTCAGACAAAACATCTGAAAAGAAGCAGGAAACTCTTGATGAAATTCTTTCACGGCACAGGAAAGAGATATCACAGCTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCAGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAACTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTTCTAAGCTAAAGGAAACACATGCCAAAGAACTGGCTGCATTAGGCTACAGCAGTGGTAATGGAAATGAAAAGAGTAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTAATAATCAACCTGAGCATACAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGGATCCAAGCAGAGCAGAGTGACATTGTAAGTGATCGAATGATTGAAAATGAGAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTCTGGGGGTAGATCTCCTCATACATACCAAGAACTTCGAGAAATGGTGGCTGCTTACATGAGAAAACATGCACCTGATTTCCTTCCATTTTTTCTGTCAGAGAATTTGATTGAAGGTGATTCTGATGAATCACTTGCTCAGAAGTTTGAAAATTATTGTAAAGAAGTGGAGTCCACGGCAATATGGGGTGGACAACTAGAGCTTGGTGCCTTGACTCACTGCCTGAAAAAGCATATTATGATATTTTCAGGGTCCTTCCCGGATGTGGAGATGGGGAAGGAGTATAAATCCGATGATGGTATTGACTCATCTAATTCGAGTATTATGCTTTCCTACCATAGGCATGCTTTTGGGCTAGGTGAGCATTATAATTCTGTGGTCCCAACATGA 1137 0.4398 MGHNGPSSSPGRYGPKSNQPKRVSPLRCIPLLSHFCVFVAVGHKHRRLRSRVAPMEDTQEIEEKAHEEVISDKTSEKKQETLDEILSRHRKEISQLQKKEVEMKKAAARGSKAEQKTKKKQVEEEVSQLSSKLKETHAKELAALGYSSGNGNEKSNLDSLVKAIAGVSVNNQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQSDIVSDRMIENEKLERKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSGGRSPHTYQELREMVAAYMRKHAPDFLPFFLSENLIEGDSDESLAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDDGIDSSNSSIMLSYHRHAFGLGEHYNSVVPT. 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04999 378 ProSiteProfiles OTU domain profile. 226 378 IPR003323 -
Seca2g04999 378 MobiDBLite consensus disorder prediction 1 15 - -
Seca2g04999 378 Pfam OTU-like cysteine protease 232 372 IPR003323 -
Seca2g04999 378 PANTHER OTU DOMAIN CONTAINING PROTEIN 87 377 - -
Seca2g04999 378 MobiDBLite consensus disorder prediction 171 201 - -
Seca2g04999 378 MobiDBLite consensus disorder prediction 1 21 - -
Seca2g04999 378 MobiDBLite consensus disorder prediction 177 201 - -
Seca2g04999 378 CDD OTU_plant_OTU5-like 217 376 - -
Seca2g04999 378 Coils Coil 79 139 - -
Seca2g04999 378 FunFam Cysteine proteinases superfamily protein 212 377 - -
Seca2g04999 378 Gene3D - 212 377 - -
Seca2g04999 378 SUPERFAMILY Cysteine proteinases 191 377 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04999 Seca-Chr2 136656179 136660060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04999 K18342 - gmx:100780620 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04999 2 136656179 136660060 Seca2g04999 2 136656179 136660060 ECH