Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04997 ATGGCTGAAGGAGAGGATGGTATTGAGCTTAAATTCCGTATATATGATGGAACTGATATAGCACACAGTACTTATTCATCATCTACGACAGTGGGTACCCTTAAGCAAAGGCTAGTTGCTGAGTGGCCTCAAGGCAAAACAGTTACACCGAAGTCAGTAAATGACGTAAAACTTATACACGCTGGAAAAGTTTTGGAAAACAACAAAACTCTTGCTGATTCCAGAATAACTTTTGGTGACATCCCTGGTGGTGCTATTACCATGCATGTTGTAGTACAGCCTCCGATAGCTAAAAAGAAGACAGGTTTGTTCAATCTTTTTATCTGA 327 0.4006 MAEGEDGIELKFRIYDGTDIAHSTYSSSTTVGTLKQRLVAEWPQGKTVTPKSVNDVKLIHAGKVLENNKTLADSRITFGDIPGGAITMHVVVQPPIAKKKTGLFNLFI. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04997 108 CDD Ubl_MUBs_plant 8 95 - -
Seca2g04997 108 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 2 101 IPR040015 -
Seca2g04997 108 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Seca2g04997 108 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Seca2g04997 108 PIRSF MUB 1 103 IPR017000 -
Seca2g04997 108 Gene3D - 1 101 - -
Seca2g04997 108 Pfam Ubiquitin-2 like Rad60 SUMO-like 7 101 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04997 Seca-Chr2 136630595 136633499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04997 - - gmx:100785440 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04997 2 136630595 136633499 Seca2g04997 2 136630595 136633499 ECH