Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04986 ATGCTGGAATCGTCGGTGGTCATCATCGGAGCCGGAACTTCTGGCATCGCCACCCCTGCTTGCTTAACCAAGCAATCCATACCTTTTATACTGCTTGAGAGAGAAGACTGTTTTGCTTCTCTGTGGCAAAAATATACCTATGATCGTCTCCATCTCCACCTAAGGAAACAAGTCTGTGAGCTTCCTCACTTTCCATTTCCACAGTCTTATCCTCTTTATGTGCCTAGGAAGCACTTCATTGACTACTTGGACAATTACCTTAAGCACTTTGATATCAACCCTTTGTACCACAGATCCGTGGAGTTAGCCGAATATGATGAGAAATGTTGGAGGGTCAGGGCTAAGAATAGGAGCTCTGGTCTAATTGAGGAATATTCTGGAAGGGAATTTGAAGATCAGCATGTTCTGGTTGTTGGATCTGGAAATTCTGGAATGGAGATTGCATTAGATTTGGCCAATTTTGGTGCCAAACCTTCCATCATTGCTCGATCCCCGGTTTATTTTCTTTCAAGGAACATGATGTATTCTGCTGGGGTTTTGCTGAAGTATCTGTCGTTGAGCACGGTGGAGAAACTGGTGGTGATAGCTAGCAGGATCGTGTATGGGGATCTAAGCAGATATGGGCTACCTTGGCCCAGGGAAGGCCCATTCACCATGAAGATCAAATCTGGAGAGATACAGGTCTTGCCAGCGGAAATAGAAAGCATAAGAGGTAATGAAGTGTTGTTTCGGGATGGTAAGTCGCACCCTTTTGATTCCATTGTTTTCTGCACAGGCTTCAAGAGATCAACTCAAAAGTGGCTTAAGGAAGCTGATGATCTTTTGAATGAGGACGGTTTTGCAAAAGCAGAGTTTCCCAAACCATTGGAAGGGTAA 876 0.4452 MLESSVVIIGAGTSGIATPACLTKQSIPFILLEREDCFASLWQKYTYDRLHLHLRKQVCELPHFPFPQSYPLYVPRKHFIDYLDNYLKHFDINPLYHRSVELAEYDEKCWRVRAKNRSSGLIEEYSGREFEDQHVLVVGSGNSGMEIALDLANFGAKPSIIARSPVYFLSRNMMYSAGVLLKYLSLSTVEKLVVIASRIVYGDLSRYGLPWPREGPFTMKIKSGEIQVLPAEIESIRGNEVLFRDGKSHPFDSIVFCTGFKRSTQKWLKEADDLLNEDGFAKAEFPKPLEG. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04986 291 Pfam Pyridine nucleotide-disulphide oxidoreductase 134 165 IPR039648 -
Seca2g04986 291 PRINTS Pyridine nucleotide disulphide reductase class-II signature 130 154 - -
Seca2g04986 291 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Seca2g04986 291 Gene3D - 125 286 IPR036188 -
Seca2g04986 291 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 115 - -
Seca2g04986 291 Gene3D - 3 124 IPR036188 -
Seca2g04986 291 Pfam Flavin-binding monooxygenase-like 5 92 IPR020946 GO:0004499|GO:0050660|GO:0050661
Seca2g04986 291 SUPERFAMILY FAD/NAD(P)-binding domain 5 172 IPR036188 -
Seca2g04986 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 130 279 IPR036291 -
Seca2g04986 291 PRINTS FAD-dependent pyridine nucleotide reductase signature 134 152 - -
Seca2g04986 291 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04986 Seca-Chr2 136528102 136531891 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04986 K11816 - gmx:100777958 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04986 2 136528102 136531891 Seca2g04986 2 136528102 136531891 ECH