Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04952 ATGGTGAAAACAAAGAAAAGGCGCACAGGAAAATTTCCTGGTAAAACAAGTGATACTTCACATTCCCCTGTTGATTCCCCAGGTGGTGATACTGATAATCAGCATGATGATGGTGATTGGATAATGGTGAAAAAGCAGAGAATCACCATCCTGGTGCCTGCCGCACCTCTTAGTGAAAGATCCTTAACAGCAGACCAAGAACCAAGTCAGATGCATCCTATGCCTCCAGTAACATCAAGTAACCACATGCAACTTCCCTTGGAGACATCTACTCTAAACCCTCCAGATAATGAACATGAGAAGACCGTTTTATTAGCTGCCCAAAAGGAGACTCATGCTGTGAGAAGAGCTCCTGCTTCCTTACCTAAGTCACCTTTAGCCAACCCATCATGTGTAGATCAAAGAATAGAATCAGAAAATCCACATCATGTGAGTATTTTGAAGTCCCACTCACATCAATTGCTTGGAGTGTCTAATATATCAAAAGTTATTAAGCAGCCCAGAACATCACTTGCACCAAGAATGTCCTCTAACTTGGCAACATTAAATCAAGGTCTGAGAGCATCAAATCTTGAGAGAAAGCTTGAAAGAGCTGGTGGGTTGAGCAAGTGGCTGACATCACTTGGACTGGAGCAGTTTGTGAGAATTTTTCAGGGGAAGTCTATCAATAAGTATCAGCTGGTAAATCTAACCATGAAAAAACTCAAGGATATGGGTGCCAGTGCGGTGGGACCTCGCAGGAAACTGATCCATGCCATAGACTGTGTTTGCCAGCCATACTGCTTTGAGGCGTATTAG 798 0.4323 MVKTKKRRTGKFPGKTSDTSHSPVDSPGGDTDNQHDDGDWIMVKKQRITILVPAAPLSERSLTADQEPSQMHPMPPVTSSNHMQLPLETSTLNPPDNEHEKTVLLAAQKETHAVRRAPASLPKSPLANPSCVDQRIESENPHHVSILKSHSHQLLGVSNISKVIKQPRTSLAPRMSSNLATLNQGLRASNLERKLERAGGLSKWLTSLGLEQFVRIFQGKSINKYQLVNLTMKKLKDMGASAVGPRRKLIHAIDCVCQPYCFEAY. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04952 265 MobiDBLite consensus disorder prediction 1 37 - -
Seca2g04952 265 MobiDBLite consensus disorder prediction 15 29 - -
Seca2g04952 265 Pfam SAM domain (Sterile alpha motif) 201 255 IPR001660 GO:0005515
Seca2g04952 265 Gene3D - 191 258 IPR013761 -
Seca2g04952 265 CDD SAM_superfamily 201 255 - -
Seca2g04952 265 PANTHER SCP160 112 263 - -
Seca2g04952 265 ProSiteProfiles SAM domain profile. 201 259 IPR001660 GO:0005515
Seca2g04952 265 SUPERFAMILY SAM/Pointed domain 200 258 IPR013761 -
Seca2g04952 265 MobiDBLite consensus disorder prediction 60 81 - -
Seca2g04952 265 SMART SAM_4 193 259 IPR001660 GO:0005515
Seca2g04952 265 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04952 Seca-Chr2 136156872 136159832 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04952 - - gmx:100804141 377.867