Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04914 ATGATGGATCCAGCGAGGACGCCACTGGGGCAAATGCTATTGGAGGAGATCACTCCGGTTGTGATGGTTCTTTCTACTCCTTCCGTCGAAGAGGCTTGTCTTAAGAACGGCCTTTCCTTCCTCCAGATGCTCACTCCGTTCTGCTCCTTCAACAACATCGACGTGCCTGTGAGGACCGCTAGTGACCAGCCCTATCGCATTCACAAGTTCAAACTGCGCTTATTTTATGCTTCCGATGTTCGGAAGCCCGATTTGAAGGTAGCTGAAGAGAAATTAAAGCAAGTTATCACAGACGCAGGGGAGAAAGTGTTTTCGGAGTTGTGCTCAGATGTGCCAGAAATTAATCATGAACTTGGGAGTTCTGAATACAGAAATACACCATCCTGGTTTCAGTTTTTCAATAAAGAGCTTGTCCGTATGGCTTCCTTTTCAGACCATGAAGCTATTGACCATCCCGTGGCATGTCTTCTAGCTGTTTCTTCAAAGGATGAACAGCCTATTAACAGATTTGTCGACCTTTTCAATACCAACAAGCTTCCTTCACTTCTTAATGATGGTGCAATGGATCCAAAGATTTTAAAGCATTACTTGTTAGTGCATGATAATCAAGATGGCCCTGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAGTACATTTGGTACAAGTGACTGCTTGCTGCTTTGCATTAATTCTTCCCCAGATGCTCCAATCAAGCATCAAGATAATCCTTGGGCTTCATATATATCTAATGTCTCACCTAGTCAAGATCTTGGTTGCTTTCTTAACGTTGATGATATCAATGAGATCAAAGATTTAATGCAAGATTTATCATCTAAGCACATCATTCCAAACATGGAGCAAAAAATTCGTGTGCTCAATCAACAGGTTTCTGCAACACGAAAAGGTTTTAGAAACCAAATTAAAAATTTATGGTGGAGAAAAGGGAAGGAAGATGCTACAGACTCTCCCTATGGTCCTACGTATAACTTTAGCTCCATTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACTGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGTCTTACGTACTTCATGTTGGATCAATCCAGAAAAGAAGCTGAGTATTGCATGGAAAATGCGTTTAACACATATTTAAAACTTGGATCATTGGGTCAGCAAAATGCTACACGATGTGGTCTGTGGTGGATAGAAATGTTGAAGGCACGGGATCTACATAAGGAGGCGGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCTTCGTACTGCTACCTGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGAGCAGATCAAACATGCAATTCGAACATATGGACGTGCTCTTTCTGTTTTTAGGGGAACTACTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAACATATGACGGAAATCTTGGTTTGTAGCCACCAGTCCAAGACAACGCAGGAATTATTTCTGAGTGACTTTCTTCAAATTGTGGAGAAAACAGGACGGACATTTGAGGTAACAAAACTTAAATTGCCCGTGATCAATATCTCTTCGCTCAAGGTCATCTTTGAAGATCACCGTACTTTTGGATCACCTTCAGCTGCTAACACCAGAGAAGGCTTGTGGCATTCTTTGGAGGAAGAAATGATACCATCATTCTCTGCTGCCAAGGCTAATTGGTTGGAGTTGCAATCAAAGCTTATCCCAAAAAAGCACAGTCAATCAAATGTTTGTGTTGTAGGAGAAGCTGTGAAGGTTAATATTGAATTCAAAAACCCTCTGCAAATCTCAATTCCCATATCTGGTGTTGCACTTATATGCAAATATTCTGCTAGTACTGATGAACTTGCATCAGATGAAAATGAATCAAATGTGGAGACTGATAATGAAGTTGACCTCTTCAGGGATATGAGCTCAGATAATTCCTCATTTTTGGTATCTGAGGTTGATTTCTTACTAGGAGATGGTGAAACAACCACGGTTCAGCTATCAGTTACTCCCAAAGCAGTAGGTACTCTTGAAATTCTTGGTGTTCGATGGAAACTCTCAGGTACAATAGTTGGCTTTCACAACTTTGAGTTGAGCCACCCAAAGAAGAATATCATAAAAGGAAGAAGGAAAGCAAAGCACTCGCCAATTGAGAAATTTAAATTTATGGTGATCAAGAGCATACCCAAGCTTCAGGGTTCCATTCACTCTTTACCTGGAAAGGCATATGCTGGAGATTTACAGCAACTTGTGCTGGAATTGAGGAATCCATCAGAATTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTGATTATTGGGAATCAAGAAAATATGAAGTCAGAGTTTCCTGCTTGCTTAACAAAGAAGACAGATTCAGTGCAAATTGATGCACGTGCTAATCCTAATACAATGTCTGACACAGTCTTTTCATTTCCAGAGGGCACTTCGGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTCAGGGCTGCTGTTCCAGGTGATATTTCTCTTTATGTGAGCATATATTATGAGATGGGAGATATATCAAGTGTCATCAGATATCGCACTCTTCGCTTGCATTACAATGTACAGGTGTTATCATCATTGGATGTCTCCTTTCAAATCAGTCCTTCTCGATTAAGAATACAAGAATTTCTTGTTCGATTGGATGTTGTTAACAAGACAAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCAACTGTTGGCCATCACTGGGAAATCTCATTACTTCAGTCTCCTGATACTATTTTTCCTTCACAAACGCTGATGGCTGGTCAAGCAATATCATGTTTCTTCACACTGAAGAACTCAAGGAGATTATCCACATCAGACGACAACACGTCTACCATTCCTTTCAGAAGTGATGTAAGATTGGTTCCCCAAAGCAGTGAGGATTTAGTTTACAATACAAACAGTGTACCTTTGGTCAATTTCCACCATCATGAAAGATTGCAGCAGAAAGTGTCGCAAAAGGATATGGGTGACTTAAATACTGTTGATTTTGTATTGATCTCTCGGCCACTCAAGAGTAACAATAATCCTGGTTTATCTGACCCTCCCCATGTTATGTCTCATCATGCATGTCACTTAAGTACTGCGAGCACGGGCCCCATTTCATGGCTAGTGGAAGGACCTCAAACCTTGCATCATGACTTCTCTGCATCCTTCTGTGAGATAAATCTTAAGATGCATCTTTGCAATTCATCTGGTGCCACTTCTTTTGTGCGCATTGACACTTTAGATTCTACTGGTAATGGTGGACAAATGAACAGTGTAAATGTGGTTCAATCAGCGATTCCTGATAACCAAGCAGGATGGCATGATGTCACACCAGTGAATGAACTCAAAGTAACATCAAATGTTCTTGAAACCCAGCCAGGAAAGGCACTATCATTGGAAAGTGTCTCCCCATACATTTGGTCAGGATCAAGCTCAACCAATCTGCACCTTAAGCCTATGTCCTCAGCGGAAATTCCTCTTCAAATCTGTGTGTTCTCTGCGGGAACATATGACCTGTCAAATTATGTTTTGAATTGGAGTCTTCCATCTGAAGGTCAGGGAGACGGTGATGAAACGAGGCAACATTCAGGCAAGTGCCAGGGTTATAAATACTATCTCACTGTGCTCCAATCCTCTTGA 3870 0.4096 MMDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGLSFLQMLTPFCSFNNIDVPVRTASDQPYRIHKFKLRLFYASDVRKPDLKVAEEKLKQVITDAGEKVFSELCSDVPEINHELGSSEYRNTPSWFQFFNKELVRMASFSDHEAIDHPVACLLAVSSKDEQPINRFVDLFNTNKLPSLLNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINSSPDAPIKHQDNPWASYISNVSPSQDLGCFLNVDDINEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDATDSPYGPTYNFSSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSLGQQNATRCGLWWIEMLKARDLHKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCEQIKHAIRTYGRALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTEILVCSHQSKTTQELFLSDFLQIVEKTGRTFEVTKLKLPVINISSLKVIFEDHRTFGSPSAANTREGLWHSLEEEMIPSFSAAKANWLELQSKLIPKKHSQSNVCVVGEAVKVNIEFKNPLQISIPISGVALICKYSASTDELASDENESNVETDNEVDLFRDMSSDNSSFLVSEVDFLLGDGETTTVQLSVTPKAVGTLEILGVRWKLSGTIVGFHNFELSHPKKNIIKGRRKAKHSPIEKFKFMVIKSIPKLQGSIHSLPGKAYAGDLQQLVLELRNPSEFPVKNLKMKISHPRFLIIGNQENMKSEFPACLTKKTDSVQIDARANPNTMSDTVFSFPEGTSVQGETPFLWPLWFRAAVPGDISLYVSIYYEMGDISSVIRYRTLRLHYNVQVLSSLDVSFQISPSRLRIQEFLVRLDVVNKTSSESFQVYQLSTVGHHWEISLLQSPDTIFPSQTLMAGQAISCFFTLKNSRRLSTSDDNTSTIPFRSDVRLVPQSSEDLVYNTNSVPLVNFHHHERLQQKVSQKDMGDLNTVDFVLISRPLKSNNNPGLSDPPHVMSHHACHLSTASTGPISWLVEGPQTLHHDFSASFCEINLKMHLCNSSGATSFVRIDTLDSTGNGGQMNSVNVVQSAIPDNQAGWHDVTPVNELKVTSNVLETQPGKALSLESVSPYIWSGSSSTNLHLKPMSSAEIPLQICVFSAGTYDLSNYVLNWSLPSEGQGDGDETRQHSGKCQGYKYYLTVLQSS. 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04914 1289 Gene3D Tetratricopeptide repeat domain 331 554 IPR011990 GO:0005515
Seca2g04914 1289 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 637 830 IPR013935 -
Seca2g04914 1289 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 169 519 IPR024420 -
Seca2g04914 1289 PANTHER TRANSPORT PROTEIN TRAPP 1 1288 IPR024420 -
Seca2g04914 1289 SUPERFAMILY TPR-like 430 551 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04914 Seca-Chr2 135694052 135710966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04914 K20305 - gmx:100809666 2273.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04914 2 135694052 135710966 Seca2g04914 2 135694052 135710966 ECH