Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04881 ATGGGAAACGCTCAGTCACCTCCCAGTGATCCTAGATATGCTTCAGCATCCAGAGCTTTTACTCAAAAGGAACTAGAAGCCTTGAGGTCTCTCTTCAATTCTTTGGCAGCTCAATCACAGAACAATGGCAAATACATCTCCCCCTCAATTTTTCAGTCATATTTTAGACTCCGTGGCCCTATTGGGGAGAGAATGTTTGATTTAGTTACTCAGGAGCGCAAGGATCAAAGATTAACCTTTGAAGACCTCGTTGTTGCTAAAGCTTCTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTCATCTTTCGCGTATTAGATGTATCCGGAGATAATTTTGTAGGGAGGTCTGATTTGGAATCTGTTATGATTGCCATTTTTAAAAATATATTATGCATAGAAGGTTCTGAAGTTAGTTCAAGTTCACATCAGGACATTGTCAACATATTTCTGAATGCTGCAAATTTCTCCATGCATGATGAAGGGTGCACTGAGGAGTCTATGTCTTTTGAAGATTTCAGAAGTTGGTGTTCTCATGTCCCAGCTGTGAGGAAGCTTCTTGGAGGCTTGCTTTTGCCACCTGATTCAGGACGACCAGGTTCTCAAATTCCTGAACTATTGACCCCAAAGGGTATTGATTCTAACATTATACTTATGAGAAAGGAATATGCTTGGCATATAGGAGGAGCACTTTCTCAGCATGAGCTGGAAGTTTGGAATCTTTTGTATCATAGTGGTGTTAATGGTCTTAGTTTTAATACATTCTTGGGCAACATTTCGTAA 783 0.3959 MGNAQSPPSDPRYASASRAFTQKELEALRSLFNSLAAQSQNNGKYISPSIFQSYFRLRGPIGERMFDLVTQERKDQRLTFEDLVVAKASYEKGTKDEIEEFIFRVLDVSGDNFVGRSDLESVMIAIFKNILCIEGSEVSSSSHQDIVNIFLNAANFSMHDEGCTEESMSFEDFRSWCSHVPAVRKLLGGLLLPPDSGRPGSQIPELLTPKGIDSNIILMRKEYAWHIGGALSQHELEVWNLLYHSGVNGLSFNTFLGNIS. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04881 260 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Seca2g04881 260 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
Seca2g04881 260 Gene3D - 1 188 - -
Seca2g04881 260 SUPERFAMILY EF-hand 3 189 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04881 Seca-Chr2 135233261 135238423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04881 102 260 EF-hand Containing Proteins AT5G06260 52.830 1.64e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04881 - - gmx:100804508 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04881 2 135233261 135238423 Seca2g04881 2 135233261 135238423 ECH