Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04848 ATGTTACAAATTGGTGTTCGGGGATTGTTCACGTCTTTACAGTCCTTGCTGGGCTGGCTTTTATGTTTTCGGCTAGCATTTTGCTACAGATTCTGGCATGTGCAATATACAACAATTGGTGGCCAATGTTATCAGAGCTCTGAACCTGCAGCTCTGATGTATGTGCTGGTACCTATGCCCTGCTTATTCTTTGGAGGAGGATCCACTCATTTTCTGATGAGCCGTGATGGTGGGGGTTGGATGGATGCTGCAAAATTTTTGACTGGAGCATCAGCCATGGGGAGCATAGCCATTCCTATAATCCTTAAGCATGCTCATATGATTGAGACTGGAGCGATGCTCATTGAGCTTGTATCGTTCTTTATATTTGTATGTACTGTTTTGTGTTTCCATCAAGCGAGCCTTGATGATGATTGGTACTTCAATGATAATGAAAGCAAGAGGAAGAGCATGCAAGACATAGGAAGTAAGCACTCTTGTCCATCACAATCAGTAATTTCACACCGCCTCAATGAAGTGGCATTTTGTAATGACAACATCACATAA 546 0.4267 MLQIGVRGLFTSLQSLLGWLLCFRLAFCYRFWHVQYTTIGGQCYQSSEPAALMYVLVPMPCLFFGGGSTHFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFVCTVLCFHQASLDDDWYFNDNESKRKSMQDIGSKHSCPSQSVISHRLNEVAFCNDNIT. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04848 181 Pfam Vacuolar protein sorting 55 51 133 IPR007262 -
Seca2g04848 181 PANTHER LEPTIN RECEPTOR-RELATED 51 138 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04848 Seca-Chr2 134975955 134981401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04848 50 140 EF-hand Containing Proteins AT1G32410 48.936 1.60e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04848 - - psat:127125618 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04848 2 134975955 134981401 Seca2g04848 2 134975955 134981401 ECH