Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04843 ATGTACTACAATGGAATCTACCATTTGTTCTACCAATACAATCCCAAAGGGTCAGTATGGGGTAACATTGTGTGGGCCCATGCAGTCTCAAGAGATCTCATCAACTGGAAAAATCTCGAACACGCTCTTTACCCATCCAAACCCTTCGACAAATTCGGGTGCTGGTCCGGGTCAGCCACCGTAGTCCCGGGTAAAGGACCCGTAATCCTTTACACCGGAATTGCCGACGAGAACAACACACAGGTCCAATGTTACGCCGCACCCGAAGATTTATCCGACCCGTATCTCAGAAAATGGGTAAAACCCGACAGTATCAACCCGATTCTAGTAGCCGATAAAGGCGTAAACGGCAGCGCGTTTCGTGACCCGACGACAGGTTGGTGGAGCAAGGACGGGCACTGGAGGATGTTGGTTGGTAGCAGAAGGAAGCGTAGAGGGATTGCTTATTTGTATAGGAGCATGGATTTTGTGAAATGGATCCGGGCCAAACACCCGATCCATTCAACAGCAGCAACGGGTATGTGGGAGTGCCCTGATTTTTACCCTGTTTCATTGAAAGGGAAAGAGGGGTTAGACACATCAGATGAAGGGAATCATGTTAAGCATGTGTTAAAGAATAGTCTTGATGTGACTAGGTTTGAGTATTATACATTGGGGACTTATTTTCCCAATAAGGATAGGTATATTCCGGAAAATACCTCAGAGGATGGTTGGGGTGGCCTTAGATATGACTATGGTAACTTTTATGCTTCAAAGTCATTTTTTGACCCTAGCAGGAACAGAAGGATCTTGTGGGGTTGGGCTAATGAGTCTGATACCAAGGAAGATGATGTTAACAAAGGATGGGCAGGAATTCAGGCAATTCCAAGAACCTTGTGGCTTGATCCTACTGGGAGACAATTGGTACAATGGCCTGTTGAAGAATTGAATAGTCTTAGAGGGAAAGAAGTTAATATGAACAATCATAAGCTTGAAAAGGGAGAATATGTTGAAGTAGGTGGAATAACTGCCGCCCAGGCTGATGTGGAAGTTACCTTCTCATTTTCAAGCTTGGACAAGGCAGAGGAATATGATCCTAGTTGGTCAAATGCACAGGATCTCTGTGCCCAAAAGGGTTCAAAACTTCAAGGTGGGGTTGGGCCATTTGGGCTTCTGACTTTGGCTTCAGAGAAGCTGGAGGAGTTCACTCCTGTGTTTTTCAGAATTTTTAAAGCTCCAAACAACTCTCATCACGTGCTTTATTTAATCTTAATTGATTGTTTTTGTTTGAACAGTTCCTCTTTGAAGAGTAACTTGTACAAGCCAGCATTTGCTGGTTTTGTAGATGTAGATTTAACCACTAAGAAACTTTCTCTTAGAAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGAGAAGGAGGGAAAACAAACATTTTGTCTAGGGTTTATCCACAGCTAGCAGTGACAAATGAAGCTCACTTGTTTGTGTTCAATAATGGTACCGAGCCAATCACTGTGGAGAACCTCAAAGCATGGAGCATGAAATCTGCTGATATAAATTGA 1545 0.4369 MYYNGIYHLFYQYNPKGSVWGNIVWAHAVSRDLINWKNLEHALYPSKPFDKFGCWSGSATVVPGKGPVILYTGIADENNTQVQCYAAPEDLSDPYLRKWVKPDSINPILVADKGVNGSAFRDPTTGWWSKDGHWRMLVGSRRKRRGIAYLYRSMDFVKWIRAKHPIHSTAATGMWECPDFYPVSLKGKEGLDTSDEGNHVKHVLKNSLDVTRFEYYTLGTYFPNKDRYIPENTSEDGWGGLRYDYGNFYASKSFFDPSRNRRILWGWANESDTKEDDVNKGWAGIQAIPRTLWLDPTGRQLVQWPVEELNSLRGKEVNMNNHKLEKGEYVEVGGITAAQADVEVTFSFSSLDKAEEYDPSWSNAQDLCAQKGSKLQGGVGPFGLLTLASEKLEEFTPVFFRIFKAPNNSHHVLYLILIDCFCLNSSSLKSNLYKPAFAGFVDVDLTTKKLSLRSLIDHSVVESFGEGGKTNILSRVYPQLAVTNEAHLFVFNNGTEPITVENLKAWSMKSADIN. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04843 514 Gene3D Glycosyl hydrolase domain; family 43 1 318 IPR023296 -
Seca2g04843 514 Pfam Glycosyl hydrolases family 32 C terminal 308 507 IPR013189 -
Seca2g04843 514 CDD GH32_Fruct1-like 1 294 - -
Seca2g04843 514 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 1 317 - -
Seca2g04843 514 Gene3D - 319 508 - -
Seca2g04843 514 SMART glyco_32 1 468 IPR001362 GO:0004553|GO:0005975
Seca2g04843 514 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 512 - -
Seca2g04843 514 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 317 508 - -
Seca2g04843 514 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 305 IPR013148 -
Seca2g04843 514 SUPERFAMILY Concanavalin A-like lectins/glucanases 305 511 IPR013320 -
Seca2g04843 514 SUPERFAMILY Arabinanase/levansucrase/invertase 1 306 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04843 Seca-Chr2 134894557 134900600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04843 1 509 Glycoside Hydrolase AT3G52600 64.683 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04843 K01193 - gmx:100777418 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04843 2 134894557 134900600 Seca2g04843 2 134894557 134900600 ECH