Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04833 ATGCAGCTTTCTTTTGATGCCAGAGGAAATAGCGTACCTACGATACTGCTATTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTAAATAGAGGAGTAGTCCCAGAAGGCATTGATGTGCACTGCTTGGCAGGTCTTATTAAGGCTTGGTTCAGAGAACTTCCTACTGGGGTATTGGACCCTCTTTCACCAGAGCAGGTGATGCAGTCCCAGTCAGAAGAAGAATGTGCCCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTCTGCTAGATTGGGCAGTAAACCTAATGGCAGATGTTGCTCAAATGGAACATTTGAACAAGATGAATGCACGTAACGTTGCAATGGTTTTTGCACCAAACATGACTCAAATGGCAGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTTGTTGTGAAGACACTGAGAGAAAGAGAGGAGTCTATTGTAAAATCAAATCCTGTTTCAAACCTAAATTCTTTTGATGATGACGGGCACCAAAATGATTCAAGAGTGATACTCAAGGATGACAGTGAAAATGGAAGTGATTGTAGTGATGACGATGCAGTATTTGTCACTGCAGTACCTTCTCGACGAAGCTCTACTCATCAAACTGAAGATGGATGTGAAACTGAAAATGGATCCAAAAGTTTACCAACATCGACCGAAAACTTTATTTCTAGTGGCAATAGATTGTTGGTTGACAGTTGTCCTTGCAGTGTTGTCTCCCAACTTTGCTCTTTGGCAATTGGACTTCAAGACTCTAGCATTACTATTGGTCAGACAAAGGGGGAGCAAGCCAAAATGTGCAAAAGCAGAAGCCTTCAATTGAGTACTTGTGATATAGACAAATGTTCCAAAAGGGTGATAGAGCTTCCAGTAGCAGGAGCTACAGAGAAGAACAGGGGAACTGCAATTATTGGGCGTATAAATTCAAGAACAGAGTTGGCTGAAGCTTGGCGTTGA 1059 0.4221 MQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPEGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAVNLMADVAQMEHLNKMNARNVAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLREREESIVKSNPVSNLNSFDDDGHQNDSRVILKDDSENGSDCSDDDAVFVTAVPSRRSSTHQTEDGCETENGSKSLPTSTENFISSGNRLLVDSCPCSVVSQLCSLAIGLQDSSITIGQTKGEQAKMCKSRSLQLSTCDIDKCSKRVIELPVAGATEKNRGTAIIGRINSRTELAEAWR. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04833 352 SMART RhoGAP_3 10 173 IPR000198 GO:0007165
Seca2g04833 352 ProSiteProfiles Rho GTPase-activating proteins domain profile. 1 181 IPR000198 GO:0007165
Seca2g04833 352 Pfam RhoGAP domain 13 147 IPR000198 GO:0007165
Seca2g04833 352 Gene3D Rho GTPase activation protein 2 183 IPR008936 -
Seca2g04833 352 MobiDBLite consensus disorder prediction 185 252 - -
Seca2g04833 352 SUPERFAMILY GTPase activation domain, GAP 5 169 IPR008936 -
Seca2g04833 352 MobiDBLite consensus disorder prediction 195 211 - -
Seca2g04833 352 PANTHER MKIAA1688 PROTEIN 1 233 IPR044785 GO:0005096
Seca2g04833 352 CDD RhoGAP 13 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04833 Seca-Chr2 134804746 134808394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04833 - - gmx:100783118 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04833 2 134804746 134808394 Seca2g04833 2 134804746 134808394 ECH