Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04821 ATGCTTCCTCTTTGCAACCCTTCTCTTTCTCTGCAATCGAGTATCGTGACCTCCATTCCATGGAAACCTGACAACCGCTCATCGATTGTCTCCATCACCAACTCTGCATCTTCCGGTGAAAGAATCAGCAACCGCCGAAGAACCATGTCTGCCTCTGAAGCCCGAATCTCACTCATTTTCGCCCTTGCTTCTCAAGCCAATTCTCTCTCCCAGCGACTTGTTGCAGACGTGGCTACTGAGACTGCGAGATACATCTTTCCGAAAAGATTTGAAAGTCGCACTCTCGAGGAGGCGTTGATGGCAGTTCCGGACCTTGAGTCTATCAAGTTCAAAGTTCTAAGTAGAAGGGACCAGTATGAGATCAGGGAAGTTGAGCCTTACATTGTAGCAGAGACTACGATGCCTGGGAAGAGTGGATTTGATTTCAGCGGTTCTTCTCAGTCCTTTAATGTCCTAGCTGAGTACCTTTTTGGTAAGAATACAACAAAGGAGAAAATGGAGATGACTACACCTGTTTTTACAAGTAAGAGTCAATCTGATGGTGTTAAAATGGATATGACAACGCCCGTGTTAACGACAAAGATGGAAGATCAAGATAAGTGGAAAATGTCTTTTGTCATGCCTTCAAAGTACGGCTCTAACTTGCCGCTGCCTAAAGATTCTTCTGTGAGGATTAAAGAGATGCCCAGAAAAATAGTTGCTGTAGTTGCGTTTTCAGGTTTTGTGAATGATGAAGAAGTTAAGCAGCGTGAACTGAAACTACGAGAAGCTTTGAAAAGTGACAGACAGTTTAAAATTAAAGAGGGAACTTCAGTAGAAATTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAATGGAAAAATAAGTAG 903 0.4319 MLPLCNPSLSLQSSIVTSIPWKPDNRSSIVSITNSASSGERISNRRRTMSASEARISLIFALASQANSLSQRLVADVATETARYIFPKRFESRTLEEALMAVPDLESIKFKVLSRRDQYEIREVEPYIVAETTMPGKSGFDFSGSSQSFNVLAEYLFGKNTTKEKMEMTTPVFTSKSQSDGVKMDMTTPVLTTKMEDQDKWKMSFVMPSKYGSNLPLPKDSSVRIKEMPRKIVAVVAFSGFVNDEEVKQRELKLREALKSDRQFKIKEGTSVEIAQYNPPFTLPFQRRNEIALEVEWKNK. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04821 300 Gene3D Regulatory factor, effector binding domain 104 178 IPR011256 -
Seca2g04821 300 Gene3D Regulatory factor, effector binding domain 179 300 IPR011256 -
Seca2g04821 300 PANTHER HEME-BINDING PROTEIN-RELATED 94 175 IPR006917 -
Seca2g04821 300 SUPERFAMILY Probable bacterial effector-binding domain 178 295 IPR011256 -
Seca2g04821 300 Pfam SOUL heme-binding protein 178 293 IPR006917 -
Seca2g04821 300 Pfam SOUL heme-binding protein 105 174 IPR006917 -
Seca2g04821 300 SUPERFAMILY Probable bacterial effector-binding domain 100 177 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04821 Seca-Chr2 134697501 134704636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04821 - - gmx:100797412 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04821 2 134697501 134704636 Seca2g04821 2 134697501 134704636 ECH