Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04816 ATGGAGAGGTTGGAATTGAAGGAGGTTCAGAGACTGGAAGGTCACAGCGATAGGGTTTGGAGTTTGGATTGGAACCCGGCTACCGGTCATGCCGGTATTCCTCTCGTCTTCGCTTCTTGCAGCGGCGACAAAACCGTCCGAATCTGGGAACAGAACCTCTCCTCTGGCCTCTGGGCCTGCAAGGTCTCTTCTCTCAAAATCCAATACTATACCATTACTCTCCTCAATTTTCATGACCATATTCAATTGAATACTTTGCAATTTGGCCTGTTCTGTTATTAA 282 0.4716 MERLELKEVQRLEGHSDRVWSLDWNPATGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACKVSSLKIQYYTITLLNFHDHIQLNTLQFGLFCY. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04816 93 Gene3D - 2 87 IPR015943 GO:0005515
Seca2g04816 93 SUPERFAMILY WD40 repeat-like 7 56 IPR036322 GO:0005515
Seca2g04816 93 Pfam WD domain, G-beta repeat 8 49 IPR001680 GO:0005515
Seca2g04816 93 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 12 50 - -
Seca2g04816 93 SMART WD40_4 5 50 IPR001680 GO:0005515
Seca2g04816 93 ProSiteProfiles Trp-Asp (WD) repeats profile. 12 50 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04816 Seca-Chr2 134681133 134681414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04816 K24730 - gmx:100778826 117.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04816 2 134681133 134681414 Seca2g04816 2 134681133 134681414 ECH