Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04802 ATGTACTCCATCTCATCCTCTCTTCCTTCCACAACCTCATTATATATTTCCTCCTCAATATTCAAAAAGGCACCCTTTACTCGCACCTACAAATTGCAACAATTAATAGGTCCAAGCCTAAACAACATAATGGAAAAATGTGGTAAATCTCTTGTTGCATTCCCAATCCTCATTCACACCCTATGCTTACTATTGTTCCCACAACCCCTACTCTCTCAAGAAAGTGATTTTGTTCGTCAGCCTGCTAGTCAGCTCATAATCACTCCCCACAAACGCTCCGATTCAGACCCCCAACAGGTGCACATTTCATTGGTGGGTAAAGATAAGGTAAGGGTGTCATGGATAACGGAAAGCAAGCACGCGGAAACTGTGGTGGAGTATGGAACACAGGCAGGGGAGTATAGTGCAAAAGCAACAGGGGAACATACCTCTTACCAATATTTTTTCTACAGTTCCGGTAAGATCCATAACACTGTGATTGGGCCTTTGAAGCCCAGCACCACATACTTCTACAGGTGTGGAGGTTCGGGCCCTGAGTTTTCCTTCAAGACACCTCCATCTGAGTTGCCCATTGAATTTGTTATCGTTGGGGACTTGGGACAAACCGAATGGACTGCATCAACCTTGAAACATGTTGATAGTAGCGATTATGATGTGTTCTTGTTACCGGGAGATCTATCTTATGCAGACACTCAACAACCCTTATGGGACTCTTTTGGTCGTCTGGTAGAGCCATACGCTAGTAAAAGGCCATGGATGGTTACTGAAGGCAACCATGAGATTGAGATTTTTCCCATTATTTACCCACAAGGCTTCGCCGCATATAATGCCCGCTGGCCTATGCCCTACCGAGAGAGTGGCTCCACCTCAAATCTCTACTACTCGTTTGAGGTTGCTGGTACCCACGTCATCATGCTAGGTTCCTACACTGATTTTGATGTTAAATCACAACAATACAAATGGCTTCAATCTGACCTTGCCAAGATTGATAGGGCAAAGACACCTTGGGTTATTGTTTTGTTGCATGCACCTTGGTATAATACTAATGAGGCACACCAAGGTGAAGGAGAATCCATGAGACAAGCCATGGAAGAATTGCTTTATAAGGCTCGCGTTGACTTGGTTTTTGCTGGGCATGTTCATGCATATGAGCGCTTCGTATGTCATGTTTTTAAGATTTTCAATTTATTTTTTTCACTTTAA 1203 0.4364 MYSISSSLPSTTSLYISSSIFKKAPFTRTYKLQQLIGPSLNNIMEKCGKSLVAFPILIHTLCLLLFPQPLLSQESDFVRQPASQLIITPHKRSDSDPQQVHISLVGKDKVRVSWITESKHAETVVEYGTQAGEYSAKATGEHTSYQYFFYSSGKIHNTVIGPLKPSTTYFYRCGGSGPEFSFKTPPSELPIEFVIVGDLGQTEWTASTLKHVDSSDYDVFLLPGDLSYADTQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQGFAAYNARWPMPYRESGSTSNLYYSFEVAGTHVIMLGSYTDFDVKSQQYKWLQSDLAKIDRAKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYKARVDLVFAGHVHAYERFVCHVFKIFNLFFSL. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04802 400 PANTHER ACID PHOSPHATASE RELATED 60 386 IPR039331 GO:0003993
Seca2g04802 400 Pfam Calcineurin-like phosphoesterase 193 383 IPR004843 GO:0016787
Seca2g04802 400 SUPERFAMILY Purple acid phosphatase, N-terminal domain 87 186 IPR008963 GO:0003993|GO:0046872
Seca2g04802 400 Gene3D - 188 395 IPR029052 -
Seca2g04802 400 Gene3D - 96 187 - -
Seca2g04802 400 CDD MPP_PAPs 190 386 IPR041792 -
Seca2g04802 400 SUPERFAMILY Metallo-dependent phosphatases 190 387 IPR029052 -
Seca2g04802 400 Pfam Purple acid Phosphatase, N-terminal domain 97 184 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04802 Seca-Chr2 134525697 134529514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04802 73 388 Miscellaneous Gene Families AT2G03450 25.263 2.56e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04802 K22390 - gmx:100817498 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04802 2 134525697 134529514 Seca2g04802 2 134525697 134529514 ECH