Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04773 ATGATGTTCAACTTCAACTTCAACATGTCTACAACTCATCACCTCCAATTTATAGTCATTCTCGTCCTCTCCCTTGACACTACGCTGACATGTGTCGCAGCCACTTCCATCCCAAAAGAACTTCTCTCGGGCTTCTCCACGGTCCCACTCTCTTCAGCGACGTCGTTTCAGCCCGTTCTGAGTGACCCCACGGGTAACTTCTCTCTGGGGTTCCTCCGCCAGAACCAAAACCAGTTGCAACTAGCCGTCGTTCACGTGGCCTCCTCCGAGCCATTCTGGATCGCAAACCCGACCCGTTTGGCATCCTGGGCCAGCACCACGCGCCTCTCCTTCAACGGAAGTCTCGTGTTGTGGGACCCACAAAATGGCGTGTCGTGGTCAACCGCAACAGATGGCGACCGCGTGGTGCTCCTCAACACCTCCAACTTGCAGGTGCAAAAAAAAGTCTCTGACACTCCTTTGTGGCAAAGTTTCCATTTTCCCACAAATACCCTCGTCCAGGACCAGAATTTCACCGCCAACATGTCTTTGGTATGGCGGTCGCCCAACGGCAACGGCTTGTACTCGTTGCGTTTAGGCGATACTTTCATGGGCTTATACGCAAATTACGGAGAAGAAAAAGGAGGGTCGTTGAGGCGGTTATTGTATTGGAAACACACAGCAATGGAAGCAAAAGCTGAAATAAAAGAAGGAGAGGGACCCCTCTACGCACGAGTCAACACGGAGGGTTATCTCGGCATGTACCAAACAAGCGCCAAACCCGTGGACGTTCAGAAGTTCAACACTTTCCAACAAACTTTCACAACCTCCTCGTTTCTGTTAGTGCGGTTAGAACCGGACGGGAATCTCAAGGGATATTTCTGGGACGGATCAAAATGGATGCTTAACTACCAGGCAATCACGGAAATCTGCGAGCTCCCCAGCCCCTGCGGTTCGTACGGTTTGTGCACACCCGGAGGGTCTGGATGCTCTTGTTTAGATAACCGGACCCGGTTAGAACCGGGTGGGTACTGTTTTGCTGGAGATGATAGTGGTAGAGATTTGTGTGGGGGAAGGATTGGTGGAGTCAATTACTGGGAGTTGAGGAAGACAGGCGTAGAGCCACCGCATAAGGAGCTACTCGGGTATGTTACGACGTCGTCTCTGGCGGATTGCGAGGGATTGTGCCAGAAGAACTGTAGCTGTTGGGGAGCGTTGTATAATACCGCTACCGGGTTTTGTTATGTTTTGGACTATCCGATCCAAACCATGTTGGGTACCGGGGATGGGTCCAAGGTGGGTTATTTTAAGGTTAGGAAAGGTGATGAGGGAAGGAACCGGGTTCGGACTCGGGTTGGAATTGTGGTTGCGGTTTTAGTTGGGATTGTTATTATTATTGGGGTTGGGGTTTGCACTATGAGATTAAGAAGGAAGAAAGGGGTGAATGGGTTACTGAAGGAGGAAAATGGGGCTTCGCCCGGCCCGTATAGGAATCTGGAATCCGCAAGTTTTAGATCTATAGAAATGTCAAATGTGCAGTAA 1521 0.5062 MMFNFNFNMSTTHHLQFIVILVLSLDTTLTCVAATSIPKELLSGFSTVPLSSATSFQPVLSDPTGNFSLGFLRQNQNQLQLAVVHVASSEPFWIANPTRLASWASTTRLSFNGSLVLWDPQNGVSWSTATDGDRVVLLNTSNLQVQKKVSDTPLWQSFHFPTNTLVQDQNFTANMSLVWRSPNGNGLYSLRLGDTFMGLYANYGEEKGGSLRRLLYWKHTAMEAKAEIKEGEGPLYARVNTEGYLGMYQTSAKPVDVQKFNTFQQTFTTSSFLLVRLEPDGNLKGYFWDGSKWMLNYQAITEICELPSPCGSYGLCTPGGSGCSCLDNRTRLEPGGYCFAGDDSGRDLCGGRIGGVNYWELRKTGVEPPHKELLGYVTTSSLADCEGLCQKNCSCWGALYNTATGFCYVLDYPIQTMLGTGDGSKVGYFKVRKGDEGRNRVRTRVGIVVAVLVGIVIIIGVGVCTMRLRRKKGVNGLLKEENGASPGPYRNLESASFRSIEMSNVQ. 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04773 506 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 291 IPR036426 -
Seca2g04773 506 SMART blect_4 50 161 IPR001480 -
Seca2g04773 506 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 41 476 - -
Seca2g04773 506 Pfam S-locus glycoprotein domain 262 327 IPR000858 GO:0048544
Seca2g04773 506 ProSiteProfiles PAN/Apple domain profile. 349 433 IPR003609 -
Seca2g04773 506 Gene3D - 47 160 IPR036426 -
Seca2g04773 506 Pfam D-mannose binding lectin 92 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04773 Seca-Chr2 134013245 134014765 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04773 - - tpra:123890423 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04773 2 134013245 134014765 Seca2g04773 2 134013245 134014765 ECH