Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04765 ATGGGGGTTGGAGAAAAGGACAAGGGGAAGGGGAAGCTCCCACTACAGGTTCCTTGGATCCCCACCACCCCTTCTAAGCCCATTCTTCCAAGACCAGCACCGATCTGCACTCCTGGAGAGGGAAGCCAGTTGGGTTCTCATTTCAGTGGGGGATTTCCATGTTGTGAATCCTCAGCTGGTGCAGAGATTAACAGTCCTCACTTACTGTCAGCACATGCAGCTGAAGTGACAAACATTGCCCATGACAGGGCCAAAACTGATGCACAGATGTCCTTTGACAACATTTCTCGTTCAACAAATGGCGTTGCTGAACTTTTGGCTCCTTCGGGATATTCTAATGCAACACATGATGCATTTTTGAGGCACCATTTGGTTCCTACTTTGAACTCACAGTTCAACCAGACCTATACATTACTCAGTCAGCATCATCCCCTTCATGGGCAATCATCTATGAATACTATCCAAGACAACCAAGATCCTCATGGTACATCATACTTGGCTTGTTGTAGCCAGACCACTTCTCAGGTTGCCCTGCCTAATCCATATAATATCATCGCAGCAGAAAACAGAAAAGTTGCGGGTCAACAAATGAATATGAAAGGAAGAGATCAAGGGGGAGAAGAGAAAAATGTCTCAGCCACTGACTGCAACAACCCTCTTATAGAATTTGCTGCTGTTTCTACACCGTGCAAAGAGAATAACAACCTCGGTAAGGAAATAAGCAATGGTGTTGATCTGAATAAAATACCTCAACCAAAACCAAAAAGAAGAAAGCATCGTCCCAAGGTCATTAGAGAAGGCAAACCCGAGAGAACTATGAAGCCGGTCACCCCAAAGCCTGTTCAATCTAAAGAAAACCCAACTAGCAAGAGGAAGTATGTGAGAAGGAAAGGATTGAACACGACTCCTCAAACAGAAGTGGAAGGGGAATCGACCAAACCATTGACGCCTGAATCTGCCAATAAGACATGTAGAAGGTCCTTAAATTTCGACATAGGAGAACCAAGAGATGGAAATTCTACATGCAGAGAAAATACAACTTCACATTTTGGCAGAGAAATTGGCATGGAGGTCGAGGAAACACAGGCTTTAAATAATCACATGTCATTACAAGATCCACAAGCCCCCAGTACCATTCTTTCAAAAAGCAATTCCCCTGGGGCCAAGCCAAATGCCAATTATGTAGAGAATGGCAGCAAAAGAAGAGGTTGGGTGATTAATCAGGATGAAAATCAAAAAATACTATCAAAATCTGTAGCACAATCAAGACCAAATGACTCCAACAGCAGTAATAGTCAACTTTTGACCACAGGATTACAAGTAGTTGGTTCCAAGAGAAAACAATCCGGTACTATTGAACATGCAGATAACAGCAGCATTAATCTGTTTGGGGCACAATATAATGTTCTGCAGGTGTACCCCCCAAAGTATTGGATTGAATTTCCAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGGGAAAAGTTCTAACACATCCAATACATCTTCCATGGCTGCCACAGAAGATGTACAACTAGCAACATGTCCTCAAGAAGATGCTAGATCACATCCTTATGCATCAGGTTATAACTGCTGGACTTTTGGTTCTGAATATAACACAGTTGGAGTCCCAGTTATACCTACAGCTGCAGAAAAAGCTATTCATGATAAACCTCAATCATTTGAGTATAACTTATCTTTAGGGCAGAGGAGGTCAACCAAGAGAAGATCAAGAGTTCCTACCAGAATTCATGATTGCGCTTCACTGACCTTAATCAGAAACTGCGGTACCAATCTAACTCATACCACAAAACCAGGAAGTTCTGGGAATGCAGAAAGACCACAGACATGCATTGATGCTTTAGTTGCAGAGATGGGTGCTTCACTCACAAAAAAGAAACGGACTAAAAAGAGAAGTACTCTTGTCAGTTCAGCATATTCTTGCACAGATAAAATGCAACAGCACCATAAATTTGTGGTGGAAAATCACAGCCTTCCCTTGCACAACTCGTTAGATTTAGCTTGTCAAGAGACATCAAAAAACATACATTCTGTGGATACATTAACAGAGCAATTTAGCCACCTAAACATATATAGAGAAGCTAGAGAGCTTGTATTGCACGGGCAGAATGCACTTGTCCCTTATGACCAGCAAAATCAAAAGCATAAAGGCCTTGTCCATGAATATGGCACCATCATTCCCTTTGAAGGCTCGTTTGATCCCATCAAAAGACAACGCCCACGACCTAAAGTTGACCTTGATGAGGAGACTAATAGAGTGTGGAAGCTTCTGATGTTGGATATAAACAGCCATGGTATTGATGGATCCGATGAAGAAAAGGCCAAAAGGTGGGAAGAAGAACGCAATGTGTTCCAGGGACGAGCAGACTCATTTATTGCAAGGATGCATCTTGTACAAGGAGATAGACGTTTTTCTCAATGGAAGGGATCGGTTGTGGATTCAGTGATTGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCCCGATTTCCCCTAAAGTCAAGCAACAAGTACAATACATACCATGAGGAAAAAACAAGCTTGATGAACAATCCACAAGTGCACATTGTGGAACCAGAAGAACATACAAAAATATATGAAAAAACATTGAACCAATCCGTTTATGAATTGAGTTCTTTGACAGTAGACACCATTGAGCATTCTGAAGAAAGAGAAGCTGTTGACAGCAATGATTCCTGCAGAACAACTGGCACAGACGGATCAATCTGTAAACTGTTGGAATCAGCTCAACAACATGATGGCGAACATAGCCCAATGGAGAGTATCAGTGCCATGACTGGGGAAAGGCAAGAAAATTCATGTCATCAGGGTGTTCAGAAAGAGTTAAATGATTTATTTTCATCCCAATGCCCTGTCATTACACCTCAAATATCTGGAGATTCTTCAATTGATCAAAATACCGAGAAGATAGGATCATTATCAGATAGCAACCCCGAAATGGAAGACCAGTCAAGCATGGCCAAATACAACCTTTTTTATAACAGAACTTCTTTCAGCAAGCTTTTAGAAATGGCCAGTTCACCCATGCTAAACAGTCAAAGCATATCAAATGAGACCATGGGAGATGCATATGGTCAATCTGCAGCCATGAGGCGTGAAAACCGGGCAGAGAACTTGGAAAAATCAAATATCACTCAAGGCTGCATAGAAACATCCAGCATCTCATGTAATGAATATACTTTGAAAATGCCCAACTCAGGAGTACTTGAAGTCAACTGCTATGATCCTCTCAAAATTCAAACCTCATCAAGTGGCACCTTGAAGAATAAAGACGAAAATGACAAAAGATCCAGTTTTCCAACGAGGAAGTCTAAAAGCCAAGCAGCAGTTTCCCATTCTCAAAGTAAGTTATCTCAATTCCATCTTCAGCAACAAAGTGATCATAAGCATAACAATGTTTCCCACATTTCAGGGCAAACTCAAGATCTTAAGCAGAAATCAAGGGAATTAGATTTTGGTGATCACAACTATGCCAAGAGGAATGAAAACAGTAAGATGGATTCTGCCGCTGTAAAATTAAGGGGCAGGGAGCGTGGAAAAGAGAAAAAGGATGACTTTGACTGGGATAGCTTAAGAATACAAGCACAAGCTAAGGCAGGAAAAAGAGAAAAGACAGAAAACACTATGGACTCCTTGGACTGGGATGCTGTGAGACGTGCAGATGTCAAGGAAATTGCTGATGCAATCAAAGAAAGGGGCATGAACAACATGCTTGCTGAACGTATTAAGAATTTCCTGAACCTATTGGTTGATGTACACGGGGGCATTGATCTTGAGTGGCTGAGAGATGTTCCACCTGATCAAGCAAAAGAATACTTGCTCAGCATAAAGGGATTGGGATTGAAAAGTGTGGAGTGTGTGCGACTCTTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGACGTATAGCAGTTCGACTGGGATGGGTACCGCTCCAGCCACTGCCTGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCGGTGTTGGAATCCATACAAAAATATCTCTGGCCCCGGTTGTGCAAGCTAGACCAAAGAACACTGTACGAGCTGCATTACCAGCTGATAACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGAGAATGTAGACACTTTGCAAGTGCTTTTGCAAGCGCAAGGCTTGCCCTGCCAGGACCAGAGCAGAAGAGTATGGTTATCACAACTGGAAACAATGCAACTTATCAGAGCCCATCAGTAGTCATCAATCAGTTGCCTTTGCCTCTTCCCGAAAACACAAACCAAGCAGAAGAACTTCAACAAACAGAAGTCATGAGGCAACTTGAAACAAAATCTGAAATCAATATCTGCCAACCTATTATTGAAGAGCCAGCAACTCCAGAGCCAGAATGCAGCCAAGTATTAGAAAATGATATAGAGGATGCCGTCTATGAGGAATCATGTGAAATTCCCACCATCAAACTAGACATAGAAGAGTTCACCATGAATTTACAAAATTACATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTAAATTCAGAAGTTGCTCACATTCCTACCCCCAAGCTGAAGAACGTGAGCCGGTTGCGAACAGAACATTCTGTTTATGAACTACCAGATTCACATCATCTTTTGGAAGGGTGGGACAAGCGAGAACCAGACGATCCAGGCAAATACCTTCTAGCTATATGGACTCCAGGTGAGACGGCAAATTCTATACAGCCACCAGAAAGAAAATGCAGCTCTCAGGACAGTGGCCAGCTCTGTAATGAGAATGAATGCTTTTCATGCAACAGTTTCCGTGAAGCAAATTCACAGATAGTTCGAGGGACAATCCTGATACCATGCCGGACAGCTATGAGAGGGAGCTTTCCACTAAATGGCACCTATTTTCAAGTCAATGAGGTTTTTGCAGATCATGACTCGAGTCTTAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTCAATAGGCGGACAGTATATTTTGGAACCTCCATACCAAGCATATTTAAAGGTTTATCAACACAAGAAATTCAACAATGCTTCTGGAGAGGATATGTGTGTGTTCGGGGATTTGAGAGGCAAACACGAGCACCACGTCCTCTGATGGCAAGGCTACATTTCCCAGCAAGCAAGCTGCCCAAGAACAAAGACAAGGCCAAAAAAGAGGCTACTCCGGCAAGCTCACAAGGATTGAATTTGAAACCAAATCCAGAGCAGCCGGAATTGCTTTCCAACACTCACGGCTGA 5373 0.4251 MGVGEKDKGKGKLPLQVPWIPTTPSKPILPRPAPICTPGEGSQLGSHFSGGFPCCESSAGAEINSPHLLSAHAAEVTNIAHDRAKTDAQMSFDNISRSTNGVAELLAPSGYSNATHDAFLRHHLVPTLNSQFNQTYTLLSQHHPLHGQSSMNTIQDNQDPHGTSYLACCSQTTSQVALPNPYNIIAAENRKVAGQQMNMKGRDQGGEEKNVSATDCNNPLIEFAAVSTPCKENNNLGKEISNGVDLNKIPQPKPKRRKHRPKVIREGKPERTMKPVTPKPVQSKENPTSKRKYVRRKGLNTTPQTEVEGESTKPLTPESANKTCRRSLNFDIGEPRDGNSTCRENTTSHFGREIGMEVEETQALNNHMSLQDPQAPSTILSKSNSPGAKPNANYVENGSKRRGWVINQDENQKILSKSVAQSRPNDSNSSNSQLLTTGLQVVGSKRKQSGTIEHADNSSINLFGAQYNVLQVYPPKYWIEFPNVQKKRRSEKGKSSNTSNTSSMAATEDVQLATCPQEDARSHPYASGYNCWTFGSEYNTVGVPVIPTAAEKAIHDKPQSFEYNLSLGQRRSTKRRSRVPTRIHDCASLTLIRNCGTNLTHTTKPGSSGNAERPQTCIDALVAEMGASLTKKKRTKKRSTLVSSAYSCTDKMQQHHKFVVENHSLPLHNSLDLACQETSKNIHSVDTLTEQFSHLNIYREARELVLHGQNALVPYDQQNQKHKGLVHEYGTIIPFEGSFDPIKRQRPRPKVDLDEETNRVWKLLMLDINSHGIDGSDEEKAKRWEEERNVFQGRADSFIARMHLVQGDRRFSQWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLKSSNKYNTYHEEKTSLMNNPQVHIVEPEEHTKIYEKTLNQSVYELSSLTVDTIEHSEEREAVDSNDSCRTTGTDGSICKLLESAQQHDGEHSPMESISAMTGERQENSCHQGVQKELNDLFSSQCPVITPQISGDSSIDQNTEKIGSLSDSNPEMEDQSSMAKYNLFYNRTSFSKLLEMASSPMLNSQSISNETMGDAYGQSAAMRRENRAENLEKSNITQGCIETSSISCNEYTLKMPNSGVLEVNCYDPLKIQTSSSGTLKNKDENDKRSSFPTRKSKSQAAVSHSQSKLSQFHLQQQSDHKHNNVSHISGQTQDLKQKSRELDFGDHNYAKRNENSKMDSAAVKLRGRERGKEKKDDFDWDSLRIQAQAKAGKREKTENTMDSLDWDAVRRADVKEIADAIKERGMNNMLAERIKNFLNLLVDVHGGIDLEWLRDVPPDQAKEYLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKSMVITTGNNATYQSPSVVINQLPLPLPENTNQAEELQQTEVMRQLETKSEINICQPIIEEPATPEPECSQVLENDIEDAVYEESCEIPTIKLDIEEFTMNLQNYMQENMELQEGEMSKALVALNSEVAHIPTPKLKNVSRLRTEHSVYELPDSHHLLEGWDKREPDDPGKYLLAIWTPGETANSIQPPERKCSSQDSGQLCNENECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSIPSIFKGLSTQEIQQCFWRGYVCVRGFERQTRAPRPLMARLHFPASKLPKNKDKAKKEATPASSQGLNLKPNPEQPELLSNTHG. 1791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04765 1790 MobiDBLite consensus disorder prediction 370 403 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 1748 1790 - -
Seca2g04765 1790 Gene3D - 1319 1407 IPR023170 -
Seca2g04765 1790 Coils Coil 1521 1541 - -
Seca2g04765 1790 CDD ENDO3c 1237 1355 IPR003265 GO:0006284
Seca2g04765 1790 SMART endo3end 1217 1389 IPR003265 GO:0006284
Seca2g04765 1790 Gene3D Hypothetical protein; domain 2 1225 1318 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 495 509 - -
Seca2g04765 1790 SMART ccc3 1390 1410 IPR003651 GO:0051539
Seca2g04765 1790 MobiDBLite consensus disorder prediction 1166 1203 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 416 437 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 1767 1790 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 486 509 - -
Seca2g04765 1790 FunFam DNA glycosylase/AP lyase ROS1 1311 1419 - -
Seca2g04765 1790 Pfam Permuted single zf-CXXC unit 1615 1646 IPR028924 -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 1126 1165 - -
Seca2g04765 1790 Pfam RRM in Demeter 1649 1749 IPR028925 -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 1 26 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 370 392 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 236 324 - -
Seca2g04765 1790 MobiDBLite consensus disorder prediction 1104 1203 - -
Seca2g04765 1790 SUPERFAMILY DNA-glycosylase 793 1412 IPR011257 GO:0003824|GO:0006281
Seca2g04765 1790 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 200 1762 IPR044811 GO:0019104|GO:0035514|GO:0080111
Seca2g04765 1790 MobiDBLite consensus disorder prediction 298 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04765 Seca-Chr2 133945931 133956290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04765 - - gmx:100787368 2285.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04765 2 133945931 133956290 Seca2g04765 2 133945931 133956290 ECH
Seca8g05228 8 142665577 142668165 Seca2g04765 2 133945931 133956290 PCT