Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04746 ATGGGGGCCTCGCTGTCGAACCTTGGAACGAACGGTTCGACCTTAGGTCCGGGCCTCGGGGACATCCCGGAGAACTGTGTTGCTCGCGTTTTTCTGCATCTCACTCCGCCGGAGATTTGCAATTTGGCGCGCCTCAATCGAGCGTTTCGTGGCGCTGCCTCCGCCGATTACGTCTGGGAAGCCAAGTTGCCCCCTAACTACCAAGATCTGCTTGAAGTATTGCCTCCTGAACGCTACCAGAATCTGTGTAAGAAGGACATTTTCGCTCTCCTCTCTCGCCCCCTACCATTCGATGACGGCAACAAGGAAGTGTGGCTGGACAGGGTCACGGGAAGGGTTTGCATGTCCATTTCGGCAAAAGCCCTGTCAATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACGCTGTAGCATATTTACAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTCAACTTTCCGTTTCCTACTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGATTTTCCAAAAGGCTTGGCCGGCGCGTATGCAATTATGAACAGACCCATGGTTGGGATATAAAACCGGTGAAATTTGAGTTGTCAACCGCCGATGGTCAGCAAGCATCATGTGAGTGCTGCTTGGATGAAACTGAGCATAATGATGCGCACAGCAATCATAAGCGCGGTTATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGAGGATCAGAACCTACTACGAAAGTTAGATTCTCCATGAAACAGATAGATTGTACACACTCTAAAGGCGGGCTTTGTGTAGACTCTGTATTTATTATACCTAGTGATTTGAGAGATCGTAAGAGAAGCGGCATTTTGAAATAA 888 0.482 MGASLSNLGTNGSTLGPGLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADYVWEAKLPPNYQDLLEVLPPERYQNLCKKDIFALLSRPLPFDDGNKEVWLDRVTGRVCMSISAKALSITGIDDRRYWTWVPTEESRFNAVAYLQQIWWFEVDGEVNFPFPTDIYTLSFRLHLGRFSKRLGRRVCNYEQTHGWDIKPVKFELSTADGQQASCECCLDETEHNDAHSNHKRGYWVDYKVGEFIVRGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRDRKRSGILK. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04746 295 PANTHER F-BOX PROTEIN PP2-A15 7 290 - -
Seca2g04746 295 SUPERFAMILY F-box domain 17 73 IPR036047 GO:0005515
Seca2g04746 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Seca2g04746 295 CDD F-box_AtSKIP3-like 19 64 - -
Seca2g04746 295 Pfam Phloem protein 2 113 282 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04746 Seca-Chr2 133714818 133720009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04746 - - gmx:100807328 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04746 2 133714818 133720009 Seca2g04746 2 133714818 133720009 ECH