Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04734 ATGGCTCCATCCAAATCCAAAGTCCAAACAAAGGCTAACAGCGCCGACGAAGTCTCTTCTATTCCTTTTCCCCTCCTTCCTCGTCCTCGCCCTTCATTTACCAACGCCACATCCTCATCTTCCTTCTTTCTTCGGTTAATCCCTTTTCATTCATTTTGCCCCAAAGTCCCTCTCCAATTTCAGCTCATTATTCGCAAAATAACGTTTTGGATTGAACAGAGAATGGGGAGAAGCAATAGTAGAAAAGAGCGAAGACGAAGCAGAAGATCAGATGAGTCTGCATCAGATTCTGAGTCCTATGAGTCAGACTCCGACAACCGCCGGAGAAGTAGTCGGCGGTCGCGTCGGGACTCAGATGATTCCAGTGATGACGATAGGGATGGGAGGAAGAAGAAGTCCTCGAGGACCGTCACTGAAGAGGAAATAGCACAATACATGGCCAAAAAGGCTCAGAGAAAGGCAATGAAAGTCGCTAAAAAATTGAAGACTAATACGGTATCGGGTTATTCCAACGACTCAAATCCATTTGGTGACTCTAATCTCAACGAGAAGTTTGTTTGGCGCAAGAAGATTGAGCGTGATGTTTCTCAAGGTGTGCCGATTGATTCGTTTTCAGTTAAAGCTGAGAAAAAGAGACAAAGAGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGAAGAGAGGAAAGGGCACTTGAGAAAGCACGGCATGAGGAAGAAATGGCATTGTTAGCCAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAGAAAAAGGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAGATTAGATTGCGTGAAGGGCGTGCCAGGCCAATTGATGTCCTAACCAAGCACCTTAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTGAAAGAAATGAGCGAGCTTCGTGATGACATCAAAATGCATCTGGATCTTGACAGAGCTACACCGACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGTGATTGGGAGCTAGCTGAAGCTCGGAAAAAGGATGCACTTGACCGAGCTAGGGTGCGTGGAGAAGAACCGCCTGCTGAGCTGCTTGCAGAAGAAAGGGGTCTACATTCCAGTGTTGAGGCAGATGTGAAGAAGCTTTTGGAGGGAAAGACACATGCAGAGTTGGAGGCTTTACGGGTTCACATTGAGTCAGAGATGCGCACTGGTACTGCAAAGGTTGTTGAGTACTGGGAGGCCATTTTAAAACGCCTCCACATATATAAGGCCAAGGCTTGTTTAAAAGAAATTCATGCCAAAATGTTACGTAAGCACTTGCAACGCCTTGAACAACCATTGGAGGGTGAAGATAAATTGGAGGATGCTCATGTTATGATACCTGAAGAGGGAGATGCTGAGGATGATGTTAAAGTTCGATCTGCAGATGAGTCGTTTTCACCAGAGCCCATTAGAGAGAATCACGAAGCTGAAAATGAGGCTGGATCATTCTCACCAGAACTGTTGCATGGTGATGAAAATGAGGAAGCTATTGACCCTGAAGAGGACAGGGCTATACTGGAGCGGAAACGTTTGGCTGTATTTGAAGAGCAGCAAAGACGAATTCAGGAAGCAATGGCATCTAAGCCTGCTCCATCTGAAGATAATTTTGAGATGAAGGCCATAAAAGCTATGGGAGCTATGGAAGATGGAGATGCAGTGTTTGGATCGGGTGCTGAAGTGAACCTAGATTCACAGGTTTATTGGTGGCATGACAAGTACAGGCCTAGAAAGCCGAAGTATTTCAACCGTGTTCACACTGGATACGAGTGGAACAAATACAATCAAACTCATTATGATCATGACAACCCACCTCCCAAAATTGTTCAAGGTTACAAATTTAATATTTTCTATCCTGATCTTGTTGACAAGGCAAAAGCCCCGACGTACACCATCGAGAAGGATGGCAGCAATGGGGAGACCTGTATTATAAGATTCCATGCAGGGCCACCATATGAAGACATAGCTTTCCGCATTGTAAACAAAGAATGGGAGTATTCTCATAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTACATGTGTACTTCAATTTCAAACGCCACCGCTACCGCAGATAA 2157 0.4469 MAPSKSKVQTKANSADEVSSIPFPLLPRPRPSFTNATSSSSFFLRLIPFHSFCPKVPLQFQLIIRKITFWIEQRMGRSNSRKERRRSRRSDESASDSESYESDSDNRRRSSRRSRRDSDDSSDDDRDGRKKKSSRTVTEEEIAQYMAKKAQRKAMKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVPIDSFSVKAEKKRQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSVEADVKKLLEGKTHAELEALRVHIESEMRTGTAKVVEYWEAILKRLHIYKAKACLKEIHAKMLRKHLQRLEQPLEGEDKLEDAHVMIPEEGDAEDDVKVRSADESFSPEPIRENHEAENEAGSFSPELLHGDENEEAIDPEEDRAILERKRLAVFEEQQRRIQEAMASKPAPSEDNFEMKAIKAMGAMEDGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKAKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR. 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04734 718 MobiDBLite consensus disorder prediction 85 138 - -
Seca2g04734 718 MobiDBLite consensus disorder prediction 473 504 - -
Seca2g04734 718 MobiDBLite consensus disorder prediction 473 525 - -
Seca2g04734 718 MobiDBLite consensus disorder prediction 1 17 - -
Seca2g04734 718 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 121 718 - -
Seca2g04734 718 SMART CactinC_cactus_3 594 718 - -
Seca2g04734 718 Pfam Conserved mid region of cactin 246 443 IPR018816 -
Seca2g04734 718 MobiDBLite consensus disorder prediction 75 140 - -
Seca2g04734 718 MobiDBLite consensus disorder prediction 1 30 - -
Seca2g04734 718 Pfam Cactus-binding C-terminus of cactin protein 594 718 IPR019134 GO:0005515
Seca2g04734 718 Coils Coil 210 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04734 Seca-Chr2 133578650 133584586 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04734 K25058 - gmx:100780087 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04734 2 133578650 133584586 Seca2g04734 2 133578650 133584586 ECH