Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04694 ATGTTCAAGAGAATCATGAAGGGAGGGCAAAAGAAGCCCTCCAAATCGGACCAAAGCGATCCATCGACCTACGGGTTCGGTCCTCCGGTAAACAACGTCGTCAATCCGGTGGTGACGGTGCCTCCGACGTCAGGAACCATCGAACCGCTCCCTCTGTTCCGCGACGTGCCGGTATCCGAGAGGCAGAACCTGTTCCTACGGAAGTTGCAGATTTGCTGCCACGTATTGGATTTCTCTGACACACTGAAATCGGTGCGGGAGAAGGAAATCAAGAGGCAAACGCTGATGGAGTTGGTGGATTTCATTCAATCGGGTTCGGGGAAGATAACGGAGGTTTGCCAGGAAGAGATGATTAAAATGGTGTCGGCGAACATTTTCCGGTGCTTGCCGCCGGCGTCGCACGAGAACACGGGGCAGGAGACCACCGATCCAGAAGAGGAGGAACCGTGTTTGGAGCCAGCGTGGCCCCATTTGCAGCTCGTTTACGAGCTTCTTCTCAGATACGTGGTTTCCTCTGATACTGATACCAAGGTTGCTAAACGGTATATTGATCATTCTTTTGTGCTGAAATTGCTTGATTTATTTGACTCCGAGGACCCTCGAGAGCGTGAGTATTTAAAAACCATCTTGCATCGTGTGTATGGAAAATTCATGGTTCATAGGCCATTTATTAGGAAGGCCATTAACAACATCTTTTATCGGTTTATATATGAGACGGAGAGGCATAGTGGGATTGGGGAGCTTCTAGAGATTCTTGGGAGCATCATTAATGGGTTTGCACTGCCCATGAAGGAGGAACATAAGCTGTTTCTTGTGAGGGCGCTTTTGCCATTGCATAAACCTAAGCCCCTTGCTGTGTACCATCAGCAGTTGTCATACTGCATCTCTCAGTTTGTGGAGAAGGATTACAAGCTGGCGGATACTGTAATTAGGGGTTTGTTGAAGTACTGGCCCGTCACCAATTGTCAGAAGGAAGTTCTCTTCCTTGGGGAACTGGAGGAGGTGTTGGAGGCCACACAAGCTGCGGAATTCCAACGCTGCATGGTTCCTCTTTTCAGACAGGTTGCCCGCTGCCTCAATAGTTCTCACTTTCAGCCCATTCAGAACTCTTGA 1113 0.4933 MFKRIMKGGQKKPSKSDQSDPSTYGFGPPVNNVVNPVVTVPPTSGTIEPLPLFRDVPVSERQNLFLRKLQICCHVLDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITEVCQEEMIKMVSANIFRCLPPASHENTGQETTDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPLAVYHQQLSYCISQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQVARCLNSSHFQPIQNS. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04694 370 Gene3D - 52 370 IPR011989 -
Seca2g04694 370 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 50 365 IPR002554 GO:0000159|GO:0007165|GO:0019888
Seca2g04694 370 PIRSF PP2A_B56 7 370 IPR002554 GO:0000159|GO:0007165|GO:0019888
Seca2g04694 370 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 37 365 IPR002554 GO:0000159|GO:0007165|GO:0019888
Seca2g04694 370 MobiDBLite consensus disorder prediction 1 28 - -
Seca2g04694 370 FunFam Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit 52 267 - -
Seca2g04694 370 SUPERFAMILY ARM repeat 62 365 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04694 Seca-Chr2 133100821 133107737 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04694 K11584 - gmx:100798308 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04694 2 133100821 133107737 Seca2g04694 2 133100821 133107737 ECH
Seca2g04694 2 133100821 133107737 Seca2g04694 2 133100821 133107737 PCT