Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04678 ATGGAGATCGATAAAGCAATTAGAGAGTGTGACGATCGAAGACTTCAGACTAAGTACAACAACGCAACTTATGTTATTCAGAGAGCTTTGGCTTTGTATTCCATTGAGGAAGTTGCCTTCAGTTTCAATGGTGGAAAGGATTCAACGGTTTTGTTGCACCTACTCAGGGCTGGCTATTTCTTGCATACAAAGGGGCATAATAGTCCCAATGGGGATCTAAAAGATTTTCCAATTCGAACAATATATTTTGAGAGTCCTTCTGCTTTCCCGGAAATCAACTCATTTACCTATGATACAGCTGCCACCTATGGTTTGCAGATTGACACCATTCGCTTAGATTTCAAGTCTGGTTTGGAGGCTTTGCTAAAGGATAATCCAATTCGAGCTATTTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCCCCTAGTTCACCTGGGTGGCCACCTTTCATGAGAGTAAATCCCATTTTAGATTGGTCATACAGAGATGTGTGGGCATTCCTTTTAACTTGTAAGGTGAAGTATTGCAGCCTTTATGATCAAGGTTATACTTCAATTGGGAGCATATATGACACAGTTCCCAACTCATTATTATCCATTAGCAATTCTTCCAAAAAATTCAAACCAGCATATTTACTTGCTGATGGAAGATTAGAGAGGGCGGGTAGGGTTAAAAGGCCATCTTCTACTTGTGGACAGCTTCCTGTTGATAGTAATGGCTTGACTAGCCTGGATATGCATAAAAACAGCATGCTCACAGCATCAATCATTGCTGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAGTTGGGACCTTATTTATGTAAGAAGCTGCATTCTGTTGGTTGGTCTGTGTTGCAACTTTCTGTTCTACACAACAATATAGATTCTGTGGCCGAAGAAGTTGAGCGGCAAAAATCTACTACTGATATGGTATTTATATATGGAGGTGTGGGTCCACTGCATTCAGATGTTACCTTAGGAGGCATTGCAAAAGCTTTTGGTGTTCGATTGGCTCCTGATGAAGAATTTGAAGAATATCTCAGGCATATCATTGGTGATCAGTGTACTGGTGACAGAAATGAGATGGCTCAATTGCCTGAGGGCATAACTGAATTATTGCATCATGACAAGTTGTCAGTGCCATTGATCAAGTGCCAAAATGTAATAATTGTTAGTGCAACAAATGTTTTGGAGCTGGAAAAGCAGTGGGACTGTTTGATTGAATTAACAAAATCTAGTGACTTACTAACTTTGCTGGAACCATATGTATCAAAGCATGTGACAACTAATCTATCAGATGTTGAAGTTGCTCAACCTCTGTCAAAGCTTTGTCTTGAATTTCCAGATCTTTATATTGGGTGTTACCGTAAATCCAGATATGGATCTGTTATAGTAAGTTTCAAAGGAAAGGACCAAACACGCCTTGAATCAGCTATAAAAGCATTAGAGAAGAAGTTTCAACCTGGTGCTTTCACAGAGATGAACTAG 1518 0.4012 MEIDKAIRECDDRRLQTKYNNATYVIQRALALYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHTKGHNSPNGDLKDFPIRTIYFESPSAFPEINSFTYDTAATYGLQIDTIRLDFKSGLEALLKDNPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVKYCSLYDQGYTSIGSIYDTVPNSLLSISNSSKKFKPAYLLADGRLERAGRVKRPSSTCGQLPVDSNGLTSLDMHKNSMLTASIIAVGDEILFGIVEDQLGPYLCKKLHSVGWSVLQLSVLHNNIDSVAEEVERQKSTTDMVFIYGGVGPLHSDVTLGGIAKAFGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELLHHDKLSVPLIKCQNVIIVSATNVLELEKQWDCLIELTKSSDLLTLLEPYVSKHVTTNLSDVEVAQPLSKLCLEFPDLYIGCYRKSRYGSVIVSFKGKDQTRLESAIKALEKKFQPGAFTEMN. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04678 505 FunFam Phosphoadenosine phosphosulfate reductase family protein 4 234 - -
Seca2g04678 505 CDD PAPS_reductase 37 194 IPR002500 GO:0003824
Seca2g04678 505 SMART MoCF_biosynth_3a 262 395 IPR001453 -
Seca2g04678 505 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 274 477 - -
Seca2g04678 505 FunFam Phosphoadenosine phosphosulfate reductase family protein 257 416 - -
Seca2g04678 505 Pfam Probable molybdopterin binding domain 263 358 IPR001453 -
Seca2g04678 505 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 258 384 IPR036425 -
Seca2g04678 505 Pfam Phosphoadenosine phosphosulfate reductase family 38 200 IPR002500 GO:0003824
Seca2g04678 505 Gene3D - 257 416 IPR036425 -
Seca2g04678 505 Gene3D HUPs 2 234 IPR014729 -
Seca2g04678 505 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04678 Seca-Chr2 132934370 132942623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04678 - - lja:Lj0g3v0206069.1 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04678 2 132934370 132942623 Seca2g04678 2 132934370 132942623 ECH