Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04454 ATGGCGGATTTAGAAAATTTGCTTCTGGAGGCTGCGGGGAGAAACCGACATTCTCGCCGCCGATGTCGGAGAAGACGACATGATGGCGAATATTCGGACTGTGGAAGTGATCCTAAGGAGGATGATTCAGATGATGAGCATAATCATACAGGTAGAAAACCCTCTGGCTCTCAAGTTCCTCTGAAAAAGAGATTTGATTCAATGGAAGGACATGATAATGATGATGATGGTTCTGACCATGAGGCCGATAGTAGTGATGAATCTGATATTGGTGATGATCTTTATAAGGATGATGATGATAGACAGAAACTATCTGAGATGACTGAATTTCAAAGAGAGATGATTTTGTCAGATAGGGCTGCCAAGAAGGATGATAAGGATTTATTGGGGAAGATAGTGTCGAAGCGTGACAAAGGAAAGAAAACTCTATCCAGACAACAGACTCCACCTCTCACGTCATCACGCGTGCGCAGGTCAACTGCCAAGGATGATGCATTAAATGAATTGCGCGCTAAGCGATTGAAACAGCAAGATTCAGAAGAACAACAACGCAGGCTGACAGAGGCATCTAGAAGTTCAGGGCATGAACATATTTCACCAAAACGCAAGCCTTTGAACACTTCAACAAGCCTTAGTAGCTCAAGCCATAGTGAAAGTGAAAGTAGGTCCTGCAGTGATGATGAAGATTTGACTGGAGATGGAGGCATTATTGATAGCGATGATGACAGGGTAATGTCTGGATTTGAAGGGCCTTCCTTTGAGGACATAAAAGGAATCACCATTCCAAGGTCAAAGCTTGCAAAGTGGTTTATGGAACCTTTCTTTGAGGAGTTAATTGTTGGTTGTTTTGTGAGAGTGGGTATTGGTAGATCAAAGTCTGGGCCTATCTACAGGCTCTGCATGGTGAAAAATGTTGATGCCTCAGATCCTGATAGGCTGTATAAATTAGAGAATAAAACCACATACAAGTACTTGAATGTTGTCTGGGGAAATGAAGCTTCTGCTGCGAGGTGGCAAATGGCTATGATTAGCGATACTGTTCCACTTGAGGAGGAGTTTAAGCAATGGCTTAAGGAAGTAGAGCGAAGTGGTGGCCGGATGCCAATCAAGAAAGAGGTATTAGAAAAAAAACAAGCTATACAAAAGATCAATGCATTTGTTTACTCAGCGGCTACCGTGAAACAAATGTTACAAGAGAAAAAGTCTGTCTCAAAGAGGCCACTAAATGTTGCAGCCGAGAAGGATCGGTTGAGGACGAAGTTGGAAATAGCACAAAGTAAGCATGATGAAGTTGAAGTGGAGAGGATCAAGACAAGACTGCAAGAATTGAAGGCATCCCGAAAAGCTCATGAGATGGATGCCAAGGCTTTGAAGCTTGCTGAGATGAACAGAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAGTAAATACAGGTTTGAAAGCAGGAGAGGCAGGTTATGATCCATTTTCAAGGAGATGGACTAGATCAAGGAACTACTATGCTTCAAAACCCGGTGAAGACCCTGCAGCTGGGAGTAATAATGCTGGTGGTGCAGTGACTGATACAGGCAGAAATAGGACTGGAGCAGCTGTGACAGTGGAGGCTGGCATGGTGGCCACTGCTGCAGCTTTAGAAGCTGCTGCTGGAGCTGGGAAGTTAGTAGACACAAGTGCTCCAGTGGATGAAGGGACAGAGTCAAATGTGCTGCACAATTTTGAGCTGCCAATATCATTAGCTATACTACAAAATTTTGGTGGTGCCAAAGGAGCTCAGGCAGGGGTTATAGCAAAAAAACAGAGAATAGAAGCAATTGTTGGATTTCGAGTCTCAGAAGATGATGCAGGGAGTCATCCGCTGACATTGACAGTCAGTGATTACAAGAGAAGAAGAGGGCTTCTTTGA 1917 0.4366 MADLENLLLEAAGRNRHSRRRCRRRRHDGEYSDCGSDPKEDDSDDEHNHTGRKPSGSQVPLKKRFDSMEGHDNDDDGSDHEADSSDESDIGDDLYKDDDDRQKLSEMTEFQREMILSDRAAKKDDKDLLGKIVSKRDKGKKTLSRQQTPPLTSSRVRRSTAKDDALNELRAKRLKQQDSEEQQRRLTEASRSSGHEHISPKRKPLNTSTSLSSSSHSESESRSCSDDEDLTGDGGIIDSDDDRVMSGFEGPSFEDIKGITIPRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVKNVDASDPDRLYKLENKTTYKYLNVVWGNEASAARWQMAMISDTVPLEEEFKQWLKEVERSGGRMPIKKEVLEKKQAIQKINAFVYSAATVKQMLQEKKSVSKRPLNVAAEKDRLRTKLEIAQSKHDEVEVERIKTRLQELKASRKAHEMDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYASKPGEDPAAGSNNAGGAVTDTGRNRTGAAVTVEAGMVATAAALEAAAGAGKLVDTSAPVDEGTESNVLHNFELPISLAILQNFGGAKGAQAGVIAKKQRIEAIVGFRVSEDDAGSHPLTLTVSDYKRRRGLL. 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04454 638 PANTHER UNCHARACTERIZED 43 637 - -
Seca2g04454 638 MobiDBLite consensus disorder prediction 79 94 - -
Seca2g04454 638 MobiDBLite consensus disorder prediction 1 244 - -
Seca2g04454 638 Coils Coil 162 182 - -
Seca2g04454 638 SUPERFAMILY Plus3-like 252 382 IPR036128 GO:0003677
Seca2g04454 638 MobiDBLite consensus disorder prediction 157 202 - -
Seca2g04454 638 MobiDBLite consensus disorder prediction 26 52 - -
Seca2g04454 638 Pfam Plus-3 domain 255 360 IPR004343 GO:0003677
Seca2g04454 638 MobiDBLite consensus disorder prediction 504 528 - -
Seca2g04454 638 MobiDBLite consensus disorder prediction 95 143 - -
Seca2g04454 638 ProSiteProfiles Plus3 domain profile. 250 385 IPR004343 GO:0003677
Seca2g04454 638 FunFam RNA polymerase-associated protein RTF1 251 383 - -
Seca2g04454 638 Gene3D - 251 383 IPR036128 GO:0003677
Seca2g04454 638 SMART rtf1 250 362 IPR004343 GO:0003677
Seca2g04454 638 Coils Coil 414 460 - -
Seca2g04454 638 MobiDBLite consensus disorder prediction 203 219 - -
Seca2g04454 638 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04454 Seca-Chr2 129970066 129971982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04454 K15178 - gmx:100791327 881.708