Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04446 ATGGAGGGTGGTGGTGGTGGTGGTAGTTTCAGGATTGGTAGTTCATCAATATGGAGGAACACTGATGCTGATATTTTCTCTAATTCTTTCCACCAAGAAGATGATGAAGAAGCTCTCAAATGGGCTGCCATTCAGAAACTCCCTACCTTTTCACGTTTGAGGAAAGGTTTGCTTACTTCACCTGAAGGGGAAGCCACTGAAGTTGATATAAAGAAGCTTGGGTTTCAAGAAAGGAGAGATTTGCTTGAAAGATTGGTGAGACTTGCTGAAGAGGACAATGAGAGGTTTCTCCTGAAGCTCAGGGATAGAATTGATAGAGTTGGAATTGATCTTCCTACAATAGAGGTTAGGTTTGAGCACTTGAACATTGAAGCAGAAGCTCATGTAGGAAGCAGAGCTTTGCCTACCTTCACTAACTTCATGGTTAATATAGTGGAGGGCTTGTTAAACTCTCTTCATATACTTCCAAGTAGAAGACAACATATAAATATTCTCCGGGATGTTAGTGGAATAATAAAGCCTGCCAGAATGACATTACTTTTGGGCCCTCCAAGTTCTGGAAAAACCACACTCTTGTTGGCCTTGGCTGGAAAACTTGATCCAAAATTAAAGTTCTCTGGAAGGGTGACTTATAATGGCTATGGAATGAATGAGTTTGTGCCCCAAAGAACTGCTGCTTATGTTGATCAACATGATCTTCACATTGGAGAAATGACTGTCAGAGAAACTTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGGGCCCGTTATGAATTACTAGCAGAATTGTCCAGAAGAGAAAAAGAGGAAAATATCAAGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACAGAAGGGCAGAAGGCAAGCTTGATAACAGATTATGTGCTAAGGGTTTTGGGACTAGAGGTATGTGCTGATACTGTTGTAGGAAATGCAATGTTAAGAGGTATCTCTGGTGGACAAAGGAAACGTGTTACAACAGGGGAGATGCTGGTTGGACCAGCTAAAGCTCTTTTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCACTGAAGCAATATGTCCACATTCTCAAAGGAACTGCAATCATCTCACTGCTGCAACCTGCACCAGAGACTTATGATCTTTTTGATGACATCATTCTACTCTCTGATAGCCACATTGTGTACCAAGGTCCCCGGGAAAATGTGCTTGAATTTTTTGAATCAATGGGATTTCAATGTCCTGAGAGAAAAGGAGTGGCAGATTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAATATTGGGCACACAAAGATCAGCCTTATAGATTTGTTACATCCCAAGAGTTTTCTGAGGCATTTCAATCATTTCATGTTGGGAGAAGACTTGGTGATGAACTTGCTACTGAATTTGACAAGTCTAAACACCACCCAGCTGCTTTGACAACCAAAAAATATGGAGTGGGAAAATGGGAACTGTTAAAAGCTTGCTTATCAAGAGAATATTTACTTATGAAGCGCAATTCATTTGTCTACATCTTCAAGCTATGCCAACTTGCTGTTCTTGCAATGATTGCCATGACCATCTTTCTCCGGACTGAGATGCACAGAGATTCAGTGACTCATGGAGGTATATATGTAGGTGCATTGTTCTATGCTGTTGTTGTGATTATGTTCAATGGACTGGCAGAGCTTTCCATGGTTGTTTCAAGGCTTCCTGTTTTCTATAAGCAAAGGGGATATCTCTTTTTCCCTCCTTGGGCATTTGCTCTTCCTGCATGGATCCTAAAAATCCCCATGACTTTTCTGGAAGTGGGTGTTTGGGTACTTCTCACCTACTATGTCATTGGTTTTGATCCATATGTTGGAAGATTTTTTAGGCAATACCTTATTCTTGTACTAGTAAACCAGATGGCTTCTTCATTATTCCGATTCATTGCAGCAATTGGGAGGGAAATGACTGTGGCTCTAACATTTGGATCATTTACACTAGCCATCCTTTTTGCTATGAGTGGTTTTGTCTTATCAGAAGACAACATAAAGAAATGGTGGTTATGGGGCTTTTGGATATCACCTATGATGTATGGACAGAATGCAATAGTAAATAATGAGTTTCTTGGGAAGAAATGGAGACATGTTCTACCTAACTCAACAGAGCCACTAGGAGTTCAAGTTTTGAAATCCCGGGGGTTCTTCACTCAATCATATTGGTATTGGATTGGTGTTGGGGCTTTGGTTGGATATACATTACTTTTCAACTTTGGTTACATCCTTGCTCTCACTTACTTGAATCCACTTGGGAAGCATCAAGCTGTTAAATCAGAGGAACCTCAAAGCAATGAACAGAATGGTAGTAGTAGAAAAGGACCTAATGTGTTGAAACGCATAAAGTCTAGCTTTTCTCAACACTCAAATAGAGTGGGAAGTGGTGAAAGGATTAGTGGAAGCACTTCATCTACTAGGCAAGAAGTAGTTGCTGCAGAGACAAATCATAACAGGAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTCCATCACCTTTGATGAAGTAACATATTCTGTTGACATGCCACAGGAAATGAGGAACCGTGGTGTTCTTGAAGATAAGTTGGTTCTTTTGAAGGGTGTGAGTGGAGCTTTCAGACCAGGTGTTCTCACTGCTCTAATGGGTGTTACTGGTGCTGGAAAAACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGGGGGTAACATAACAATCTCTGGCTATCCAAAGAAGCAAGAAACATTTGCAAGGATTTCTGGATATTGTGAGCAAAATGATATCCATTCTCCTCATGTTACTGTTTATGAATCCTTGCTTTATTCAGCATGGCTTAGATTGTCCCCAGACATCAATGCTGAAACCAGGAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAACTGAATCCACTAAGGAATGCATTAGTTGGATTGCCTGGTGTAAATGGTCTCTCAATAGAGCAACGCAAAAGGTTGACTATTGCAGTTGAACTTGTGGCAAATCCTTCTATAATATTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCAGCTGCTATTGTTATGAGAACAGTTAGGAACACAGTAGACACTGGAAGAACAGTTGTCTGTACCATCCACCAGCCTAGCATTGATATATTTGAATCTTTTGATGAGCTATTTCTAATGAAGCAAGGAGGACAAGAGATATATGTGGGGCCACTTGGATATCATTCCTCCCATTTAATTAGTTACTTTGAGGGAATCCAAGGGGTCAGTAAGATTAAAGATGGCTATAATCCGGCAACATGGATGTTGGATATCACAACTTCAGCAAAAGAAACAGAATTAGGGATTGACTTTTCTGAGGTGTACAAAAGTTCAGAGTTATACAGGAGAAATAAAGCACTTATTCAAGAATTAAGTACTCCAGCTCCTGGTTCAAAAGATCTTTATTTTCCTTCACAGTACTCAACTTCCCTTTTCACCCAATGCATGGCATGCTTATGGAAACAACATTGGTCTTACTGGCGCAATCCTATTTACACTGCCATAAGATTTCTTTACTCAACTGCTGTAGCTGTTTTGCTTGGGAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGCCATGGGCTCCATGTATGCTGCTGTTCTCCTTATTGGTATTAAGAATGCTAATGCAGTGCAGCCAGTGGTTGCTATTGAACGAACAGTCTTTTATAGGGAAAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCTCAGGTTCTAATTGAGCTCCCATATGTTCTTGTACAAGCTGTGGTCTATGGCTTTATAATTTATGCAATGATTGGTTTTGAATGGACTGTGGCTAAAGTTTTCTGGTACCTATTCTTCATGTATTTCACCTTCTTGTACTTCACATACTATGGCATGATGTCAGTGGCTGTGACCCCAAATCAACACATTTCCTCTATAGTTTCTTCTGCATTCTATGCAGTATGGAATCTCTTCTCAGGATTCATAATCCCACGACCAAGGATCCCAGTGTGGTGGAGGTGGTACAGTTGGGCAAATCCAGTAGCTTGGAGTTTGTATGGACTAGTGGCTTCACAGTATGGAGATATAAAGCAAAACATTGAATCCAATGAAGGAAGGCCAACAGTGGAAGGCTTTGTGAGAAATTACTTTGGTTTCAAGCATGATTTTCTTGGAGTGGTTGCAGCTGTCATTGTTGCATTCCCAATAGTTTTTGCATTTGTCTTTGCCATATCAGTGAAGATGGAAAGAGAAGAAGGAAGTGGGTTGAGGCCAATGGACGCTGAGCAACTGAGAGAGCATGCTCATAAGATGGTCGACTTCATTGCTGATTACTACAAATCCATCGAAAATTTCCCAGTTCTCAGCCAAGTTCAGCCAGGTTATCTTGGGAAGCTTTTACCAGATTCTGCACCTACTTATCCTGATTCATTGCAAAATGTTTTGGATGATGTACAGGAAAAGATATTACCAGGAGTGACACATTGGCAAAGCCCAAATTATTTTGCATATTTTCCTTCCAATAGTAGCATTGCTGGATTTCTAGGTGAGATGCTCAGTGCTGGTCTTAACATTGTGGGTTTCAGCTGGATAACTTCTCCTGCTGCTACTGAACTTGAAACGATTGTTCTGGATTGGCTTGCCAAGGCACTTGAGCTGCCTCGTGATTTCTATTCTACTGGGCAAGGTGGTGGAGTTATTCAGGGAACAGCAAGCGAAGCTGAGCTAGTTGTCTTGTTGGCTGCCCGTGACAAGATCTTAAGGAGGGTTGGAAGGAGTGCCCTTCCTAAGCTTGTGACATATGCATCTGATCAAACACATTCTGCTTTACAAAAAGCCTGCCAGATAGGAGGGCTTAATCCAGAGCTTTGCAGGTTGCTAAAAACTGATTGTTCCACTAATTTTGCTCTTTCTCCTGATGTACTTTCTGAAGCAATTTCAAGTGATATTGCCAGCGGTCTCATACCCTTTTTCTTATGTGCTACCGTTGGTACTACTTCATCGACAGCTGTTGATCCTCTGCCTGCATTGGCAAAAATTGCTAAGGCCAACAAAATGTGGTTTCATGTAGACGCTGCTTATGCTGGAAGTGCTTGTATATGTCCAGAGTACCACCACCACATTGATGGTGTTGAAGAAGCAGACTCATTTAACATGAATGCACATAAATGGTTCCTGACAAACTTTGACTGTTCCCTACTTTGGGTTAAGGACAGGAGTGCTCTGATTCAGTCACTGTCTACAAATCCTGAATATCTGAAAAACAAGGTCTCTGAAGGAAACATGGTCATAGATTACAAAGATTGGCAAATTCCTCTTGGGCGTCGCTTTAGATCATTAAAACTGTGGATGGTGTTGCGACTCTATGGATTGGAAGGTCTGCGAAGTCACATAAGAAACCACATTGCAATGGCTGCTTATTTTGAGGAGCTTATTGGTCAGGACACAAGATTCAAGATTGTTGCGCCTCGCACATTCTCTTTAGTATGTTTTCGGCTTTTGCCTCCTCTCAACTCTGAAGATCATGGCAACAAGCTAAATCGAGATCTACTAGAGTCAGTAAATGCGACAGGAAATGTTTTCATAACACACACGGTTCTATCAGGTGAGTACATTCTACGTTTTGCTGTAGGAGCACCATTGACAGAAACGAGGCATGTCAAGGTGGCGTGGCAGATATTGCAAGATAAAGCCACTGTTCTACTTGAGAGTTTATAG 5817 0.4116 MEGGGGGGSFRIGSSSIWRNTDADIFSNSFHQEDDEEALKWAAIQKLPTFSRLRKGLLTSPEGEATEVDIKKLGFQERRDLLERLVRLAEEDNERFLLKLRDRIDRVGIDLPTIEVRFEHLNIEAEAHVGSRALPTFTNFMVNIVEGLLNSLHILPSRRQHINILRDVSGIIKPARMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGRVTYNGYGMNEFVPQRTAAYVDQHDLHIGEMTVRETLAFSARVQGVGARYELLAELSRREKEENIKPDPDIDVYMKAVATEGQKASLITDYVLRVLGLEVCADTVVGNAMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTAIISLLQPAPETYDLFDDIILLSDSHIVYQGPRENVLEFFESMGFQCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFVTSQEFSEAFQSFHVGRRLGDELATEFDKSKHHPAALTTKKYGVGKWELLKACLSREYLLMKRNSFVYIFKLCQLAVLAMIAMTIFLRTEMHRDSVTHGGIYVGALFYAVVVIMFNGLAELSMVVSRLPVFYKQRGYLFFPPWAFALPAWILKIPMTFLEVGVWVLLTYYVIGFDPYVGRFFRQYLILVLVNQMASSLFRFIAAIGREMTVALTFGSFTLAILFAMSGFVLSEDNIKKWWLWGFWISPMMYGQNAIVNNEFLGKKWRHVLPNSTEPLGVQVLKSRGFFTQSYWYWIGVGALVGYTLLFNFGYILALTYLNPLGKHQAVKSEEPQSNEQNGSSRKGPNVLKRIKSSFSQHSNRVGSGERISGSTSSTRQEVVAAETNHNRKRGMVLPFEPHSITFDEVTYSVDMPQEMRNRGVLEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELNPLRNALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKQGGQEIYVGPLGYHSSHLISYFEGIQGVSKIKDGYNPATWMLDITTSAKETELGIDFSEVYKSSELYRRNKALIQELSTPAPGSKDLYFPSQYSTSLFTQCMACLWKQHWSYWRNPIYTAIRFLYSTAVAVLLGSMFWNLGSKIEKQQDLFNAMGSMYAAVLLIGIKNANAVQPVVAIERTVFYRERAAGMYSAFPYAFAQVLIELPYVLVQAVVYGFIIYAMIGFEWTVAKVFWYLFFMYFTFLYFTYYGMMSVAVTPNQHISSIVSSAFYAVWNLFSGFIIPRPRIPVWWRWYSWANPVAWSLYGLVASQYGDIKQNIESNEGRPTVEGFVRNYFGFKHDFLGVVAAVIVAFPIVFAFVFAISVKMEREEGSGLRPMDAEQLREHAHKMVDFIADYYKSIENFPVLSQVQPGYLGKLLPDSAPTYPDSLQNVLDDVQEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLNIVGFSWITSPAATELETIVLDWLAKALELPRDFYSTGQGGGVIQGTASEAELVVLLAARDKILRRVGRSALPKLVTYASDQTHSALQKACQIGGLNPELCRLLKTDCSTNFALSPDVLSEAISSDIASGLIPFFLCATVGTTSSTAVDPLPALAKIAKANKMWFHVDAAYAGSACICPEYHHHIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRSALIQSLSTNPEYLKNKVSEGNMVIDYKDWQIPLGRRFRSLKLWMVLRLYGLEGLRSHIRNHIAMAAYFEELIGQDTRFKIVAPRTFSLVCFRLLPPLNSEDHGNKLNRDLLESVNATGNVFITHTVLSGEYILRFAVGAPLTETRHVKVAWQILQDKATVLLESL. 1939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04446 1938 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 854 1106 IPR003439 GO:0005524
Seca2g04446 1938 FunFam Histidine decarboxylase 1459 1539 - -
Seca2g04446 1938 SMART AAA_5 174 399 IPR003593 GO:0016887
Seca2g04446 1938 SMART AAA_5 891 1083 IPR003593 GO:0016887
Seca2g04446 1938 SUPERFAMILY PLP-dependent transferases 1459 1929 IPR015424 -
Seca2g04446 1938 Pfam Plant PDR ABC transporter associated 718 780 IPR013581 -
Seca2g04446 1938 Gene3D Aspartate Aminotransferase, domain 1 1833 1938 IPR015422 GO:0003824
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1571 1590 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1805 1820 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1552 1570 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1531 1550 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1464 1483 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1596 1616 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1848 1867 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1505 1524 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 PRINTS Aromatic-L-amino-acid decarboxylase signature 1487 1504 IPR010977 GO:0006520|GO:0016831
Seca2g04446 1938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 1086 IPR027417 -
Seca2g04446 1938 Pfam Pyridoxal-dependent decarboxylase conserved domain 1493 1866 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca2g04446 1938 Pfam ABC-2 type transporter 1179 1393 IPR013525 GO:0016020|GO:0140359
Seca2g04446 1938 Pfam ABC-2 type transporter 501 713 IPR013525 GO:0016020|GO:0140359
Seca2g04446 1938 Pfam ABC-2 type transporter 380 460 IPR043926 GO:0140359
Seca2g04446 1938 Pfam ABC transporter 165 347 IPR003439 GO:0005524
Seca2g04446 1938 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 1749 1770 IPR021115 GO:0016831
Seca2g04446 1938 MobiDBLite consensus disorder prediction 808 829 - -
Seca2g04446 1938 Gene3D - 1540 1832 IPR015421 GO:0003824
Seca2g04446 1938 FunFam Histidine decarboxylase 1540 1832 - -
Seca2g04446 1938 CDD DOPA_deC_like 1534 1929 - -
Seca2g04446 1938 FunFam ABC transporter G family member 34 152 456 - -
Seca2g04446 1938 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 422 IPR003439 GO:0005524
Seca2g04446 1938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 422 IPR027417 -
Seca2g04446 1938 CDD ABCG_PDR_domain1 154 404 IPR034001 -
Seca2g04446 1938 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 11 1449 - -
Seca2g04446 1938 Gene3D - 1454 1539 - -
Seca2g04446 1938 Gene3D - 151 461 IPR027417 -
Seca2g04446 1938 Pfam ABC transporter 882 1034 IPR003439 GO:0005524
Seca2g04446 1938 Gene3D - 854 1094 IPR027417 -
Seca2g04446 1938 Pfam ABC-transporter N-terminal 83 140 IPR029481 -
Seca2g04446 1938 CDD ABCG_PDR_domain2 851 1089 IPR034003 -
Seca2g04446 1938 FunFam ABC transporter G family member 40 868 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04446 Seca-Chr2 129875843 129890417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04446 K08711 - gmx:732607 2546.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04446 2 129875843 129890417 Seca2g04446 2 129875843 129890417 ECH